| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1125 |
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| Symbol | |
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| ID | 5370688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1338653 |
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| End bp | 1339216 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640829324 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_001365340 |
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| Protein GI | 152999659 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT TCGAACGATT GACACAAAAA GACTTTCAAC GAGGCTTCTC ATTAATTGAA
GTGCTTGTTG CATTGGTGAT CTTAGTCATT GGCTTAATCG GTATTTTTAA TCTGCATATC
GTTGCAAAGC GTGGCAGTTT TGAGTCATTT CAGCAAACCC AAGCCTCCTA TTATGCAAAC
GATATTATCA ATCGAATGAA GTTGAATAGA ACACAACTGG GCAATTACGA TGGTGAGTAC
ACAGGCTCTC TGGGTAAACC CGGTAGTGTT TGTGATGTTG CAGTTGGAGC CGTGAATATA
TGTACTCCAG AAGAGACAGA AGCTTGGGAC CTATATCAGT GGGAGCAGAG TTTTATGGGG
GCCGCTGAAG TTGTGGGTAG TCAGAATGTT GGGGGGTTAG ATTCACCAAC GGCTTGTATT
AGTGTAAATG GTTCAACTGT AACAGTTGCT GTTGCGTGGA GAGGGATTCG AGAGGGCGCG
GGTACAAGTT ATTCTGGTAG TGAATGCGGA AAAGATATTG GTACGCGTAG ACGGCTTTTT
ATTCTTTCGA CAGTGATTAT TTAG
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| Protein sequence | MAKFERLTQK DFQRGFSLIE VLVALVILVI GLIGIFNLHI VAKRGSFESF QQTQASYYAN
DIINRMKLNR TQLGNYDGEY TGSLGKPGSV CDVAVGAVNI CTPEETEAWD LYQWEQSFMG
AAEVVGSQNV GGLDSPTACI SVNGSTVTVA VAWRGIREGA GTSYSGSECG KDIGTRRRLF
ILSTVII
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