Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1114 |
Symbol | |
ID | 5369336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1326281 |
End bp | 1327723 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829313 |
Product | amino acid carrier protein |
Protein accession | YP_001365329 |
Protein GI | 152999648 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000596574 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGAAA CCATAGTTAA TTTTTTGAAT GCGCTACTTT GGGGTAAGTT GTTAGTATAT GGACTGGTAG GAGCTGGTCT TTATTTCACC ATTAGACTTG CCTTTATTCA GTTAACCCAT TTTAAACATT CCATCAAAGT CATGACAATG AGTCGCCAAG GCTGCGATAG CGGTCTTTCA TCATTTCAAG TCTTTTGTAC CAGTATGGCG GCCCGTGTTG GTGCCGGTAA TATGGCCGGT GTTGCAGTTG CTATTGGTGC TGCAGGTCCT GGTGCGGTAT TTTGGATGTG GCTTATTGCT ATCTTAGGTA TGGCTACCGC TATGGTTGAA TCAACCTTAG CGCAGGTTTA CAAAGTGCGA GATCATAACG GTCAGTTCCG CGGCGGTCCT TCCTATTATA TGGAAAAAGG CTTGGGTCAG CGCTGGATGG GCATTTTATT TGCCGTCTTT CTGATCATTG CCTTTGGTCT GGTATTCAAC GCGGTACAAG CGAATACCAT TACCGGAGCG ATGGAGCGAG TATTTGGGTT TAATCCTACT TATGTCGGGA TTGGACTAGT GATTGCCAGT GGATTTGTGA TTGTCGGTGG CCTGCGTAAA GTCGCACGAG TCTCTGAGTT TATCGTCCCT ATCATGGCAT TAGCCTACAT TCTCGTTGCC TTCATTATCG TTATTTTCAA TCTAGATCAA CTGCCTGCGA TTATTAGCTT AATTGTGAAG AGTGCTTTTG GTTGGCAAGA GGCTGCTGCT GGCGGCGTGG CTTATACCGT CGCGCAGGCT ATGCAAGCGG GTATTGCACG CGGACTTTTC TCAAATGAAG CGGGTATGGG CAGCGCGGCG AATGTTGCGG CAAGTGCATC GCCTAATCCG AACCATCCGG CATCCCAAGG TTTTGTCCAG ATGATGGGGG TATTTGCGGA TACTATCGTT ATTTGTACTG CAACGGCTGC AATTATCCTG CTATCAGGGG ATGTGGGTTC GAGTGACGAT GGCATTCGTT TAACCATCAA TGCCATGTCA TCCCATGTCG GAGACTGGGG TGGTGCGTTT ATTGCGGTGG CGATTTTCTT ATTCTGCTTT ACCTCCATCA TAGCCAATTA CTCTTACGCT GAAACAAACG TAATGTTTTT AATGGGTAAC AGTACCAAAT TACTTCCTTT GTTCCGTTTG TGTGTATTGG GCATGGTAAT GTTTGGTGCC GTGGCGAAGA TAAGTCTAGT GTGGAACTTA GCCGACGTTT CTATGGGATT GATGGCGACA GTGAATATTA TTGCGCTCTT ATTGTTGTCT GGTTTGGCCA TTCGCGTCAT CAATGATTAT CGCGAACAGG TTAAAGCGGG TAAGACACCA GAGTTTGACC GTAGTAAGTT CCCTGAATTA ATGGATCAAC TTGATGATGA CATTTGGCAA GATGCCAGTC TCAAGCCAGT AAAAAAGCCT TAG
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Protein sequence | MLETIVNFLN ALLWGKLLVY GLVGAGLYFT IRLAFIQLTH FKHSIKVMTM SRQGCDSGLS SFQVFCTSMA ARVGAGNMAG VAVAIGAAGP GAVFWMWLIA ILGMATAMVE STLAQVYKVR DHNGQFRGGP SYYMEKGLGQ RWMGILFAVF LIIAFGLVFN AVQANTITGA MERVFGFNPT YVGIGLVIAS GFVIVGGLRK VARVSEFIVP IMALAYILVA FIIVIFNLDQ LPAIISLIVK SAFGWQEAAA GGVAYTVAQA MQAGIARGLF SNEAGMGSAA NVAASASPNP NHPASQGFVQ MMGVFADTIV ICTATAAIIL LSGDVGSSDD GIRLTINAMS SHVGDWGGAF IAVAIFLFCF TSIIANYSYA ETNVMFLMGN STKLLPLFRL CVLGMVMFGA VAKISLVWNL ADVSMGLMAT VNIIALLLLS GLAIRVINDY REQVKAGKTP EFDRSKFPEL MDQLDDDIWQ DASLKPVKKP
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