Gene Shew185_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1108 
Symbol 
ID5370335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1317963 
End bp1318499 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID640829307 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001365323 
Protein GI152999642 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.210963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAA GACTCATGCA TGATCATAAA CATATAGCTG TGTTGCTAAA TGTTTTAAAA 
AACAAGCAGA TGAAGCTGTC CGAAGGTGAG TCAATCAACT TCATCGTGGT GCGCGATATC
GTTGAATATA TGCAAGGATA TGCTGAGCGT TGCCATCATC CGGTTGAAGA CATTATTTAT
GCCTACTATC TTGCGCATAA AGCTAATGAC AGTATCGATA AGTTGAGTGC CGAACACGAG
TTAGTGATCC AAGCATCGGC GGCTTTGATG ACGACGTTGA ATCTGATCCT CAGTGATATT
GTGGTTGCCC GTGAGAAACT GATTGTTGAT TTTGCAGATT ATGTCGCATT ACAAGAGCGA
CATATGCAAA TGGAGGAGCG GGAAATATTT CCGTTATTGG CCAAAACCTT GACTGAACAA
GATTGGCAGT TGATTGAGTC TGAGTGCCAG AAATCCTTGA TTGATGATCC TTTATTCTTA
GATCGCGAGC AGAAAGAATT TGAGGACTTG CGGGCTTATC TAACAATGGC TGACTAG
 
Protein sequence
MLKRLMHDHK HIAVLLNVLK NKQMKLSEGE SINFIVVRDI VEYMQGYAER CHHPVEDIIY 
AYYLAHKAND SIDKLSAEHE LVIQASAALM TTLNLILSDI VVAREKLIVD FADYVALQER
HMQMEEREIF PLLAKTLTEQ DWQLIESECQ KSLIDDPLFL DREQKEFEDL RAYLTMAD