Gene Shew185_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1103 
Symbol 
ID5370059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1311718 
End bp1312209 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID640829302 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_001365318 
Protein GI152999637 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCCC TTGTTGCTGT TGTTATGGGT TCTAAAAGTG ATTGGCCCAC GATGGAAGCC 
GCCGCTGAGA TAATGGATAA ACTGCAAGTG CCTTATCATG TTGAAGTGGT TTCCGCCCAT
AGAACGCCAG ATAAACTCAT GGAGTTTGCA GCCTCTGCCG CCGATCGTGG TTTTAAAATC
ATCATTGGTG GCGCCGGTGG TGCTGCGCAC TTACCCGGTA TGATTGCCTC TAAAACTCGC
TTACCCGTAT TAGGTGTCCC AGTCCAAAGT AAAGCCCTGT CAGGTATGGA TAGCTTATTG
TCTATCGTCC AAATGCCAAA AGGCATTGCC GTCGGCACCT TAGCCATAGG CACTGCGGGC
GCATTCAATG CGGGATTATT GGCCTGCCAA ATCCTTGCAA ATAACGATGC TGAATTAGCG
GCTCGTGTTG ACGCTTTCAG AGAAGAACAG ACCCGTGCGG TACTGGACAA TCCAGATCCG
AGGGAAGTTT AA
 
Protein sequence
MQALVAVVMG SKSDWPTMEA AAEIMDKLQV PYHVEVVSAH RTPDKLMEFA ASAADRGFKI 
IIGGAGGAAH LPGMIASKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG
AFNAGLLACQ ILANNDAELA ARVDAFREEQ TRAVLDNPDP REV