| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1095 |
|---|
| Symbol | |
|---|
| ID | 5369561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1300824 |
|---|
| End bp | 1302083 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640829294 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_001365310 |
|---|
| Protein GI | 152999629 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTC AAACCATTAG CCGCATTCCG TTTTGGCAAA AAGTCTTAGC AGGCTTTATC
TTAGGTGCGC TCGTTGGCGT TATTTTAGGT GAAAGCGCCA CAGTGCTAAA ACCACTCGGT
GATCTGTTCA TTGGCGCCAT TAAGATGTTG GTCGCGCCTT TGGTCTTTTG TGCCATTGTC
GTCAGTATCA CATCGCTCGG CTCGCAAACT AGCCTAAAAC GCTTAAGCCT TAAAACCTTA
GGTATGTTCA TGCTGACAGG CACGATTGCC TCGCTGATCG GCTTAGCCGT AGGTTCGATG
ATCGACATGG GCGGCACTAT GCAGCTCACG GCAACGGAAG TGCGCGAGCG TAATATTCCC
GGTTTTGCAC AAGTGTTGCT CGACATGATA CCAGTCAATC CTTTCGCCTC ACTGGCTGAA
GGCAAGGTAC TGCAAATTAT CGTGTTTGCC GCGTTAGTGG GTATCGCTAT CAACAAAGTT
GGCGAGAAGG CTGAGCCATT AAAACGCACC ATAGAAGCGG GCGCAGAAGT CATGTTCCAA
CTGACTCGCA TGGTCTTAAA ACTCACTCCT ATCGGTGTGT TTGGTTTAAT GGCTTGGGTT
GTCGGTGAAT ACGGTTTATC TACCTTACTG CCGTTAGGTA AGTTTATTGG GGCTATCTAC
ATTGCCGCCT TTATCCACAT CATCTTTGTT TACGGTGGCT TAGTGAAATT TGTCGGTGGT
TTAAGCCCGC TGCAATTTTT CCGCAAAGCT ATGCCAGCGC AGTTAGTCGC CTTTAGTACT
TCTTCAAGTT TCGGAACTTT ACCTGCGAGT ACTCGCGCGG TCGAAACCAT GGGCGTATCA
AAGCGTTATA GCGCCTTTGT GATGCCATTA GGCGCAACCA TGAACATGGA CGGCTGTGGG
GGTATTTATC CTGCGATTGC CGCTATCTTC ATCGCCCAGA TTTACAATAT TCCGCTCGAT
ACACTGGACT ATGTGATGAT TGCCGTGACT GCGACTGTCG CTTCTGTTGG TACCGCTGGC
GTGCCGGGAA GTGCAATGGT GATGTTAACT GTGACCTTAG GTGTGATTGG TCTGCCACTT
GAAGGCATTG CCTTTATCGC CGCGATTGAC CGTATTATCG ATATGATCCG CACAGCAACG
AACGTGACGG GAGATATGAT GACAGCAGTC GTGATTGGTA AATCGGAAAA TGAACTCGAT
GAAGCGCAGT TCTATTCAAA CGATAACCAA GACATTACAC CTGTGAGTTC GCAGCAATAA
|
|---|
| Protein sequence | MILQTISRIP FWQKVLAGFI LGALVGVILG ESATVLKPLG DLFIGAIKML VAPLVFCAIV
VSITSLGSQT SLKRLSLKTL GMFMLTGTIA SLIGLAVGSM IDMGGTMQLT ATEVRERNIP
GFAQVLLDMI PVNPFASLAE GKVLQIIVFA ALVGIAINKV GEKAEPLKRT IEAGAEVMFQ
LTRMVLKLTP IGVFGLMAWV VGEYGLSTLL PLGKFIGAIY IAAFIHIIFV YGGLVKFVGG
LSPLQFFRKA MPAQLVAFST SSSFGTLPAS TRAVETMGVS KRYSAFVMPL GATMNMDGCG
GIYPAIAAIF IAQIYNIPLD TLDYVMIAVT ATVASVGTAG VPGSAMVMLT VTLGVIGLPL
EGIAFIAAID RIIDMIRTAT NVTGDMMTAV VIGKSENELD EAQFYSNDNQ DITPVSSQQ
|
|---|
| |