| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1082 |
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| Symbol | |
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| ID | 5372238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1278422 |
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| End bp | 1279192 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829275 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001365297 |
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| Protein GI | 152999616 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0607342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGAA CTTGCATCCT GCTAGAATGG CTATCCCATT CATATTTCGT CATTTGTGGT
GTTATGCAAT CTAAGCGCGG CCGACTCGAT CGTTATCTTT GTACCCAGTT ACACACGCAC
CGTAAAGCGG TGCGTGAACT GCTATTATCG GGCCGAGTGC GCGTCGATGG ATTGATAGTG
AAGGACATGG ATAGGCAAGT GGATGAGTTT TCCCACATCC AACTCGATGA GCACATACTG
CAGGCCAATG CGCCCGTCTA CGTGATGCTT CACAAGCCGA TTGGAGTGGT GAGTGCTACC
AAAGATATTC AGCATAAAAC AGTGATTGAT TTGCTTGATT GCGAAGCCCG TGATGAGTTG
CATATTGCTG GCAGACTAGA TTTAAACTCT TCGGGTTTGT TGTTATTGAC CAATGATAGC
CGCTGGTCTG ATGCGCTGAT GTCACCCACA CACAAGGTCG ACAAAGTGTA TCGGGTTACC
TTAGCTAATC CCATAACCGA AGAATACATC GCTGCATTTG CCGAAGGGAT GTATTTTGGC
TTTGAAGATA TTACAACCCA ACCCGCTAAG CTGGTTATCC TCGCTGATAA CGTAGCTGAA
GTGACTTTAC ATGAAGGTAA GTATCATCAA ATCAAACGGA TGTTTGGTCG GTTCCGCAAT
CCGGTTGTTG GCCTGCATCG ATTATCGATA GGCGATATTG TGCTTGATGA AAAGTTGGCA
CCGGGTGAAA GTCGCGCGCT CACTGCCGCT GAAGTTGCCT CTATCCGTTA A
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| Protein sequence | MSRTCILLEW LSHSYFVICG VMQSKRGRLD RYLCTQLHTH RKAVRELLLS GRVRVDGLIV
KDMDRQVDEF SHIQLDEHIL QANAPVYVML HKPIGVVSAT KDIQHKTVID LLDCEARDEL
HIAGRLDLNS SGLLLLTNDS RWSDALMSPT HKVDKVYRVT LANPITEEYI AAFAEGMYFG
FEDITTQPAK LVILADNVAE VTLHEGKYHQ IKRMFGRFRN PVVGLHRLSI GDIVLDEKLA
PGESRALTAA EVASIR
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