Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1071 |
Symbol | |
ID | 5370308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1270199 |
End bp | 1270912 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640829264 |
Product | two component transcriptional regulator |
Protein accession | YP_001365286 |
Protein GI | 152999605 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000676378 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGCC CACAATCGAA CCACAGAGTA TTATTGGTTG AAGACGACGT TCGCCTAGCA AACTTGATTG TAGATTACCT AAAATCCCAT GGTATGCATG TTGAAGTTGA ACGCCGTGGC GATACAGTGC TAACACGATT AATCAATTAC AAGCCAGATA TCATACTGTT AGACATTATG CTACCGGGCA TGGATGGTCT CACTCTGTGT GAGAAACTGC CCGATTATTT CGCAGGTCCA ATCCTATTGA TGAGCGCACT TGGCTCAAGT GAAGATCAAA TCAAAGGACT AGAACTCGGT GCCGATGACT ACGTGGTCAA GCCCGTCGAT CCTGCTCTGT TAGTTGCGCG GATCAACAAC TTACTTCGCC GTCAGAATCA GCCACCACAG GCAGAATCAC ACTGTCTAAC CTTCGGTAAA TTGAGTATCG ACCCGCATAC CCATGCGATT CGTCTTAATG AAACTGAAAT TGATCTCACC AGCCATGAAT TCGAATTGCT GTGGTTACTG GCCTCGCAAG CGGGCCAAGT GCTCAGCCGT CAGTATATTT ATCAGTTGTT ACTCAATATT GATTTCGATG GTAAAGATCG AAAAATTGAC GTGCGGATCT CTAGATTACG TAAAAAACTC AACGATAATA TTGAGACACC TTTCAGAATT AAAACCGTTT GGGGACAAGG TTATCTCTTT GCTCCTGAAG CTTGGAATAA CTAA
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Protein sequence | MTSPQSNHRV LLVEDDVRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM LPGMDGLTLC EKLPDYFAGP ILLMSALGSS EDQIKGLELG ADDYVVKPVD PALLVARINN LLRRQNQPPQ AESHCLTFGK LSIDPHTHAI RLNETEIDLT SHEFELLWLL ASQAGQVLSR QYIYQLLLNI DFDGKDRKID VRISRLRKKL NDNIETPFRI KTVWGQGYLF APEAWNN
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