Gene Shew185_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1062 
Symbol 
ID5373079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1260842 
End bp1262392 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content48% 
IMG OID640829255 
ProductATPase central domain-containing protein 
Protein accessionYP_001365277 
Protein GI152999596 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAATTT TTAGGTTAGT TAAAAGGGAT GTGAAAGACA TGCAAGATAT TCGCGATTTA 
ACCTCAGTGC TGCGCTCCAA TACGCCAATC GTAGTGATTG AAACCTATGA AGAATATCGC
GTGGTCGAGT TACTTAAACG GGTCGCCAGT GTGCTTTATC AACCTGTGTT TACTTGGAGC
ATTACCCAAG GTTTAGCACG GGTCGATAAA CCTATGGCGG CGCAAAAGTT TAATAGCGAA
CCCACAGATT TGCTTGGACA AATTAAATCA ACCTCGCAGC AGGGGATTTA TGTGCTGTGC
GACTTTCATC CCTTTGTGAT TGATGCGCCA AAGAATGTCC GTTTACTCAA AGAAATCGCC
CTCGAATACG AGACACTGCA ACACACATTA GTGCTAGTGA GTCATGCCTT TGATATCCCG
CCCGAAATCA AACGTTATTG CGCCTATTTT CAATTAACCT TGCCAAGCAC AGTGCAATTG
CAAAACCTGA TTTACCTTGA GGTCGATAAA ATTCGTCACC AAGGCACGCC GTTATTGGTC
GATGATACCG CTGTGGTTAA ATTGGCAGAG AATCTGCGGG GTGTGACCTT AGACGATGCT
CGTCGTCTGG TGCGCAAAGC CATAGTCGAT GATGGTGCTA TTACCTTGTC TGATATTGAT
GCCATCAATA AAGCTAAGTT TCAGTTACTC GACTTAAATG GCGTGCTGCA ATTTGAATAC
GACACCAGTG ATTTCTCGCA GGTCGCTGGG CTGCATAATC TTAAAAAATG GCTCAAGCAG
CGCGCACCCA TAGCGGCTGT CAGCACCCTT GACCAAGGCG ATAAGCCGAC TCCAGTTCAG
CAGGCTAAAG CGCTCGATGC GCCTAAGGGG ATTTTGCTGC TCGGTGTTCA GGGCAGTGGT
AAGAGCCTCG CGGCTAAGGC TGTTGCGGGC GTCTGGCAAC GACCTTTGCT CAGACTCGAT
ATGGCTGCCT TATATAACAA ATACATAGGT GAAACCGAGA AGAACCTGCG AAATGCACTG
GAGCTCGCCG ACATGATGTC GCCCTGCGTG CTTTGGATAG ATGAAATTGA AAAAGGCTTA
AGCGGCAATA GCAGCGATGA GGGCACCTCG ACGCGTATTC TCGGCACCTT ACTCACTTGG
ATGGCGGAGC GTAAATCTGA AGTGTTTGTG GTGGCGACCG CGAATGACAT TCAAGCCTTG
CCGCCAGAAT TGATGCGAAA GGGCAGGATG GATGAAATCT TTTTTGTCGA TTTACCCGAC
GAAGCCATAC GTAAAGCCAT CTTCTTAATC CATTGTCAGC GCCGTGGAAT CGATGTGGCG
AGCTTAGATC TCGCCCAATT ATCGGCCCGC AGCCAAGGAT TTTCTGGCGC CGAAATCGAA
CAAGCGGTTA TTGCTGCCAT GTATACCGCA AGAAGCGTTG AGCGCAGTGT CGATCAAGTG
TTACTACTCG AAGAACTCAG TAAAACTCGG CCTTTATCTG TGGTCATGAG CGATAAAATC
AATGCGCTAC GACAATGGGC CGCAAGCCGA ACCGTGAATG CCCATGAGTA A
 
Protein sequence
MAIFRLVKRD VKDMQDIRDL TSVLRSNTPI VVIETYEEYR VVELLKRVAS VLYQPVFTWS 
ITQGLARVDK PMAAQKFNSE PTDLLGQIKS TSQQGIYVLC DFHPFVIDAP KNVRLLKEIA
LEYETLQHTL VLVSHAFDIP PEIKRYCAYF QLTLPSTVQL QNLIYLEVDK IRHQGTPLLV
DDTAVVKLAE NLRGVTLDDA RRLVRKAIVD DGAITLSDID AINKAKFQLL DLNGVLQFEY
DTSDFSQVAG LHNLKKWLKQ RAPIAAVSTL DQGDKPTPVQ QAKALDAPKG ILLLGVQGSG
KSLAAKAVAG VWQRPLLRLD MAALYNKYIG ETEKNLRNAL ELADMMSPCV LWIDEIEKGL
SGNSSDEGTS TRILGTLLTW MAERKSEVFV VATANDIQAL PPELMRKGRM DEIFFVDLPD
EAIRKAIFLI HCQRRGIDVA SLDLAQLSAR SQGFSGAEIE QAVIAAMYTA RSVERSVDQV
LLLEELSKTR PLSVVMSDKI NALRQWAASR TVNAHE