Gene Shew185_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1054 
Symbol 
ID5372455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1250346 
End bp1251296 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content50% 
IMG OID640829247 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001365269 
Protein GI152999588 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.895498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG TTGTACTCGA TGGCGAAACC TTAAATCCTG GCGATCTCAG TTGGCAATCC 
TTGACTGGAT TAGGCGAGTT TGCGTGTTTC CCCCGCACCG CTGGCGCCGA TATTGTTGCG
CGTGCCCAAA GTGCAGAGAT CATTCTCACC AATAAAACGC CGCTCAATGC TAAGACTCTG
GCGCAACTTC CGGCACTGAA ATACATAGGC GTATTGGCAA CGGGTACTAA CGTTGTCGAT
ATAGCGGCTG CAAAAGCGCG CGGAATAGTG GTAACGAATG TGCCCGCCTA TGCGCCCGAT
GCCGTAGCGC AGATGGTTTT TGCCCATATA CTGCATCACA CCCAAGCCGT GGCTGCCCAT
CATCAAGCCG TGGTCGATGG TCTGTGGGTG AACTGCCAAG ATTTTTGTTT CACCTTAATG
CCGCTGCAAT CCTTAAAAGG CAAGACTTTA GGTTTAATAG GTTATGGTGA TATCGGCCAG
CAGGTTGGGA CGCTCGCCCT TGCATTCGGG ATGAAAGTGC TCGTCAATAC CCGCTCTGTT
ATCAAAGACT TGCCCCAAGG TTCCACTTGG GTACCGCGTG ATACTGTGCT GAGCGAATCA
GATATTATCT CGCTGCATTG CCCGCTTACC CCTGAGACTG AGCAATTTAT CAATCACCAA
GCACTCGCCT TGATGAAGCC TAATGCGCTG CTTATTAATA CGGCGCGCGG TGGATTAATT
GATGAGTCCG CGCTTGCAGC AGCGCTTTCA CAAAACCACT TATTTGCCGG TGTCGATGTA
TTATCGACCG AGCCGCCCAG CGCGGATAAT CCCTTATTGC ATGCACCAAA TATCAGCATT
AGTCCCCATA ATGCGTGGGC GACTAAGGAA GCCAGACAAA GTCTACTCAA TATTGCCGTT
GCGAATGTGC ACGGTTATTT ACAGGGTGAA GTGATTAATT GTGTGAATTA A
 
Protein sequence
MKIVVLDGET LNPGDLSWQS LTGLGEFACF PRTAGADIVA RAQSAEIILT NKTPLNAKTL 
AQLPALKYIG VLATGTNVVD IAAAKARGIV VTNVPAYAPD AVAQMVFAHI LHHTQAVAAH
HQAVVDGLWV NCQDFCFTLM PLQSLKGKTL GLIGYGDIGQ QVGTLALAFG MKVLVNTRSV
IKDLPQGSTW VPRDTVLSES DIISLHCPLT PETEQFINHQ ALALMKPNAL LINTARGGLI
DESALAAALS QNHLFAGVDV LSTEPPSADN PLLHAPNISI SPHNAWATKE ARQSLLNIAV
ANVHGYLQGE VINCVN