| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1047 |
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| Symbol | pdxA |
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| ID | 5372223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1242064 |
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| End bp | 1243050 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829240 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001365262 |
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| Protein GI | 152999581 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0886626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCACTA AACGTATTGC CGTTACCCCA GGCGAACCCG CAGGTATTGG CCCCGATTTA
GTCGTACAAC TCGCTCAGCA GGCTTGGCCT GCTGAGTTAG TCGTTTGTGC GGATCCAGAA
TTATTAACCA GCCGTGCTAA ACGACTCGGT TTGCAAGTGA CTTTCCGCCC TTACCAGCCA
AATCAAGCGC CTAAACCGCA AGAAGCGGGC ACATTAACCA TTGCCCCCTT CAAGCTAGTG
ACCGAATCGA TTTGCGGTCA GCTCGATGAG CAAAACAGCA CTTATGTAGT TGAAACCTTG
CGTTATGCGG GTGAGAAAAA CATGAGCGGC GAGTTTGATG CAGTCGTGAC AGGTCCGGTA
CACAAAGGCA TTATCAATCA AGCGGGTATT TCCTTTAGTG GCCATACTGA GTTTTTTGCC
CATCAAGCAA ATTGCCCAGA TGTGGTGATG ATGCTGGCAA CGCCGGGATT ACAAGTGGCA
CTCGTGACCA CACATATTCC ACTGGCCTAT GTTGCAAAAG CGATAACGCG TCAACGCCTA
CAGCATATTA TCAAGATTTT ACATGCCGAT CTCATCAGCA AATTTGGCAT AGTTTCACCG
AAAATTTATG TTTGTGGCCT TAATCCACAC GCAGGTGAAG ACGGCCATTT AGGGCGTGAA
GAAATCGACG TGATTATTCC TGCACTCAAC GAGTTGCGAG AAGAGTTCCA GATGAATATT
GTCGGCCCAT TACCGGCCGA TACCCTGTTC CAACCTAAAT ATTTACAGGA CGCCGATGTC
GTCTTGGCCA TGTACCATGA CCAAGGACTT CCCGTTCTCA AGTCACAAGG ATTTGGCAAA
TCGGTAAACA TCACCTTAGG TTTACCCTAT ATTCGTACCT CGGTTGACCA TGGTACGGCG
CTCGATCTCG CGGGTACAGG CAAAGCCGAT ATTGGCAGCT TTGTGTGTGC TCTGAATAAA
GCCATTGAGT TATCCTCAAA GAACTAA
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| Protein sequence | MSTKRIAVTP GEPAGIGPDL VVQLAQQAWP AELVVCADPE LLTSRAKRLG LQVTFRPYQP
NQAPKPQEAG TLTIAPFKLV TESICGQLDE QNSTYVVETL RYAGEKNMSG EFDAVVTGPV
HKGIINQAGI SFSGHTEFFA HQANCPDVVM MLATPGLQVA LVTTHIPLAY VAKAITRQRL
QHIIKILHAD LISKFGIVSP KIYVCGLNPH AGEDGHLGRE EIDVIIPALN ELREEFQMNI
VGPLPADTLF QPKYLQDADV VLAMYHDQGL PVLKSQGFGK SVNITLGLPY IRTSVDHGTA
LDLAGTGKAD IGSFVCALNK AIELSSKN
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