Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1047 |
Symbol | pdxA |
ID | 5372223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1242064 |
End bp | 1243050 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829240 |
Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
Protein accession | YP_001365262 |
Protein GI | 152999581 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0886626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCACTA AACGTATTGC CGTTACCCCA GGCGAACCCG CAGGTATTGG CCCCGATTTA GTCGTACAAC TCGCTCAGCA GGCTTGGCCT GCTGAGTTAG TCGTTTGTGC GGATCCAGAA TTATTAACCA GCCGTGCTAA ACGACTCGGT TTGCAAGTGA CTTTCCGCCC TTACCAGCCA AATCAAGCGC CTAAACCGCA AGAAGCGGGC ACATTAACCA TTGCCCCCTT CAAGCTAGTG ACCGAATCGA TTTGCGGTCA GCTCGATGAG CAAAACAGCA CTTATGTAGT TGAAACCTTG CGTTATGCGG GTGAGAAAAA CATGAGCGGC GAGTTTGATG CAGTCGTGAC AGGTCCGGTA CACAAAGGCA TTATCAATCA AGCGGGTATT TCCTTTAGTG GCCATACTGA GTTTTTTGCC CATCAAGCAA ATTGCCCAGA TGTGGTGATG ATGCTGGCAA CGCCGGGATT ACAAGTGGCA CTCGTGACCA CACATATTCC ACTGGCCTAT GTTGCAAAAG CGATAACGCG TCAACGCCTA CAGCATATTA TCAAGATTTT ACATGCCGAT CTCATCAGCA AATTTGGCAT AGTTTCACCG AAAATTTATG TTTGTGGCCT TAATCCACAC GCAGGTGAAG ACGGCCATTT AGGGCGTGAA GAAATCGACG TGATTATTCC TGCACTCAAC GAGTTGCGAG AAGAGTTCCA GATGAATATT GTCGGCCCAT TACCGGCCGA TACCCTGTTC CAACCTAAAT ATTTACAGGA CGCCGATGTC GTCTTGGCCA TGTACCATGA CCAAGGACTT CCCGTTCTCA AGTCACAAGG ATTTGGCAAA TCGGTAAACA TCACCTTAGG TTTACCCTAT ATTCGTACCT CGGTTGACCA TGGTACGGCG CTCGATCTCG CGGGTACAGG CAAAGCCGAT ATTGGCAGCT TTGTGTGTGC TCTGAATAAA GCCATTGAGT TATCCTCAAA GAACTAA
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Protein sequence | MSTKRIAVTP GEPAGIGPDL VVQLAQQAWP AELVVCADPE LLTSRAKRLG LQVTFRPYQP NQAPKPQEAG TLTIAPFKLV TESICGQLDE QNSTYVVETL RYAGEKNMSG EFDAVVTGPV HKGIINQAGI SFSGHTEFFA HQANCPDVVM MLATPGLQVA LVTTHIPLAY VAKAITRQRL QHIIKILHAD LISKFGIVSP KIYVCGLNPH AGEDGHLGRE EIDVIIPALN ELREEFQMNI VGPLPADTLF QPKYLQDADV VLAMYHDQGL PVLKSQGFGK SVNITLGLPY IRTSVDHGTA LDLAGTGKAD IGSFVCALNK AIELSSKN
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