Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1046 |
Symbol | ksgA |
ID | 5372222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1241242 |
End bp | 1242048 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829239 |
Product | dimethyladenosine transferase |
Protein accession | YP_001365261 |
Protein GI | 152999580 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0615563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA AAGTACATTT AGGCCACACG GCCAGAAAGC GTTTCGGACA AAACTTCCTT ACCGACGGCA ATGTGATTGA CCGCATTGTG GGCGCAATTG CCCCCGATAA TCACCATGTG ATGGTCGAGA TCGGCCCAGG CCTTGGTGCC TTAACCGAAC CCGTAGCCGA AGCTGTAGAT AACCTGACCG TCGTCGAACT TGACCGCGAT CTAGTTGAAC GCTTACATCA TCACCCAGTC CTTAAAGATA AACTGACCAT TCACCAAGGT GATGCACTGC AGTTTGATTT TGGTCAACTG AGTGTGCCTG GCAAAAAGAT GAAAGTGTTT GGTAACTTAC CTTACAACAT TTCAACGCCG CTGATGTTCC ACCTGTTCGA ATTTGCCGAA CAGATTGAAA CCATGCACTT TATGCTGCAA AAAGAAGTGG TACTGCGTTT ATCGGCAAGC CCAGGCTGTA AAGCCTATGG CCGTTTAACG GTAATGGCGC AATACTTCTG CCAAGTGGTT CCGGTTCTTG AAGTGCCGCC CCACAGCTTT ACGCCCGCAC CTAAGGTCGA CTCAGCAGTC GTACGCTTAT TGCCATACGC TGTTAAGCCG TTCCCTTGCA AAGATGTGAC CGTACTACGT CACCTTTGTA CTACGGCGTT CAACATGCGT CGTAAGACTT TGCGTAATAA CTTAAAGCAC ATGTTATCTG ACGATGAGTT CGAGCAATTA GGGATTGACT CAAGTCAACG CCCAGAGCAG ATTAGCGTGC AACAGTATGT TGCTATGGCT AACATGGTTT GCGATAAGAA AGCATAA
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Protein sequence | MSNKVHLGHT ARKRFGQNFL TDGNVIDRIV GAIAPDNHHV MVEIGPGLGA LTEPVAEAVD NLTVVELDRD LVERLHHHPV LKDKLTIHQG DALQFDFGQL SVPGKKMKVF GNLPYNISTP LMFHLFEFAE QIETMHFMLQ KEVVLRLSAS PGCKAYGRLT VMAQYFCQVV PVLEVPPHSF TPAPKVDSAV VRLLPYAVKP FPCKDVTVLR HLCTTAFNMR RKTLRNNLKH MLSDDEFEQL GIDSSQRPEQ ISVQQYVAMA NMVCDKKA
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