Gene Shew185_1038 details

Gene Information

• Locus tag: Shew185_1038
• Symbol: obgE
• ID: 5370678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 1233964
• End bp: 1235133
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640829231
• Product: GTPase ObgE
• Protein accession: YP_001365253
• Protein GI: 152999572
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000432526
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTG TCGATGAGGC AGTAATTAGG GTCGAAGCAG GCGACGGCGG TAGCGGTTGT 
GTTAGCTTTA GGCGCGAAAA GTATGTACCT GATGGTGGTC CTGATGGTGG TGATGGTGGC 
GACGGCGGCA GTGTTTTCCT GCAAGCTGAC GAAAACTTCA ACACTTTGAT CGAGTTCCGT 
TTTGAACGTT TTCACATGGC TGAACGTGGC GAAAATGGTC GTGGCCGTGA TTGTACCGGT 
CACAGCGGTA AAGATTTGAT CTTAAAAGTT CCTGTTGGTA CTCGCGCGGT CGATCATGAT 
ACTGAAGAAG TCCTTGGGGA TTTAACGACC CACGGTCAAA AGCTATTGGT TGCCAAAGGT 
GGTTTCCATG GTTTAGGTAA CACCCGTTTT AAGAGCAGTA CTAACCGTGC CCCACGTCAA 
AAGACGTTAG GAACACCTGG TGAAGTTCGT AGCCTTAAAT TAGAGTTGTT ACTGCTGGCT 
GACGTTGGTT TGCTTGGCAT GCCTAACGCG GGTAAGTCGA CATTCATTCG TGCGGTTTCC 
CGTGCAACGC CGAAAGTGGC TGATTATCCG TTTACAACAC TAGTGCCTAA CTTAGGTGTG 
GTTAATCCAC GTCCTGGTCA AAGCTTTGTG ATCGCGGATA TTCCAGGTCT TATCGAAGGC 
GCAGCCGATG GTGCTGGTTT AGGTATTCGC TTCTTAAAGC ATCTTGAGCG TTGTCGTATT 
CTACTGCACA TCATCGACAT TGAGCCTATT GACGGAACCG ATCCGGTTGA GTCTGCGCGC 
GCTATCGTTG GTGAGCTTGA GAAGTACTCT CCAAAGTTGG CGAGCAAGCC ACGTTGGTTA 
GTCTTTAACA AAACCGATTT GCTGCTTGAA GAAGAGCTGC AACAAAAGGT TGATCGCATC 
GTTAAAGAAA TGGGTTGGGA AGGCGACGTT TACACTATTT CTGCCTACAA CCGCGACGGC 
ACTAATGAGT TGGCATTAAA GCTCCTCGAT TATATTGCGA GCTTGCCACC AGAAGACAAT 
GAAATCGACC CAGACAGTGA AGTCGAGTTC AAGTGGGATA ATTATCATCA AGCTAACTTA 
GATTCTGTAA ATGAAGACTA TGTTGATGAA GATGATGACG ACGACTTTGA TGATGACGAC 
TACGACGTAG AAGTTATTTA CCAGAGATAA 

 

Protein sequence

MKFVDEAVIR VEAGDGGSGC VSFRREKYVP DGGPDGGDGG DGGSVFLQAD ENFNTLIEFR 
FERFHMAERG ENGRGRDCTG HSGKDLILKV PVGTRAVDHD TEEVLGDLTT HGQKLLVAKG 
GFHGLGNTRF KSSTNRAPRQ KTLGTPGEVR SLKLELLLLA DVGLLGMPNA GKSTFIRAVS 
RATPKVADYP FTTLVPNLGV VNPRPGQSFV IADIPGLIEG AADGAGLGIR FLKHLERCRI 
LLHIIDIEPI DGTDPVESAR AIVGELEKYS PKLASKPRWL VFNKTDLLLE EELQQKVDRI 
VKEMGWEGDV YTISAYNRDG TNELALKLLD YIASLPPEDN EIDPDSEVEF KWDNYHQANL 
DSVNEDYVDE DDDDDFDDDD YDVEVIYQR