Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1034 |
Symbol | |
ID | 5372449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1231176 |
End bp | 1231841 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829227 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001365249 |
Protein GI | 152999568 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000379797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCAGG CAACATGGCA AACATTTATC GATGAGCAAA AAGCATTGCC TTATTTTCAG CAACTAAGTG CGTTTGTAGA CAATGAACGT AGGGCTGGGA AAGTGGTTTA TCCACCCGAA GCCGATGTTT TTAATGCCTT TACTATGACT CCGCTTGAAA AGGTCAAAGT GGTATTGATT GGCCAAGATC CCTATCACGG CCCAGATCAA GCCCATGGTT TATGCTTTTC GGTCAAACGC GGTATTAAAC CGCCGCCTTC CTTAGCCAAT ATGTACAAGG AATTAGCGAC GGATATTGAT GGCTTTACCA TTCCATCCCA CGGGGATTTA TCCGCATGGG CGGAGCAGGG GATATTAATG CTCAATACGG TATTAACCGT TGAGCAAGGT AAGGCGCACT CCCATGCCAA AGCAGGCTGG GAAGTGTTTA CTGCTGCCGC GCTGGAATTA TTAAATCGCC AGACACAGCC GATTATCTTC GTGCTTTGGG GCAGTCATGC CATCAAAAAA GGTCAAGTGA TTAACGCACC GCAACATCAA GTGCTCACTG GGCCGCATCC TTCACCTTTA TCGGCCTATC GGGGTTTCTT TGGCTGTGGG CATTTTTCTC AAGTGAATCA ATTATTACTT GAGCGGGGCG AAGCGCCGAT CCGCTGGCAG GTTTAA
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Protein sequence | MTQATWQTFI DEQKALPYFQ QLSAFVDNER RAGKVVYPPE ADVFNAFTMT PLEKVKVVLI GQDPYHGPDQ AHGLCFSVKR GIKPPPSLAN MYKELATDID GFTIPSHGDL SAWAEQGILM LNTVLTVEQG KAHSHAKAGW EVFTAAALEL LNRQTQPIIF VLWGSHAIKK GQVINAPQHQ VLTGPHPSPL SAYRGFFGCG HFSQVNQLLL ERGEAPIRWQ V
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