Gene Shew185_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1025 
Symbol 
ID5372432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1218572 
End bp1220173 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content47% 
IMG OID640829218 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001365240 
Protein GI152999559 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACG ATCAAGACTC TCAACTCAAA CTAGACTACT CATCACTGGT CGATCTGATC 
GAGAAAACCA GCCTGCGTTA TGGCGATAAA CCCGCCTATG CCTGCCTTGG TAAAACCAGC
AGTTTTAATG AGATAGAACG CGACTCTCGT TACTTTGCCG CCTATTTACA AAATAAGACC
ACACTCAAAC CGGGCGATCG CATCGCCATT CAATTGCCCA ATATCACCCA ATTTGTCATC
GCGGCCTACG GCGCAATCAG GGCTGGGCTA ATCCTTGTTA ATACGAATCC TTTATATACC
GAGCGCGAGC TTATTCATCA GTTCAATGAT TCTGGTGCTA AAGCGCTCGT GGTGTTATCC
GACCTATTGC CGACCTTGGC CAAAGTCATC GACAGTACTC AAATAGAACT CGTCATCTCC
ACCCATCCTT TAGATTTGAT CGATCCGCAT GTGCAGCCAA AAACAGGGCT TAAGAATGTC
GAGTTTTGTC AGATTTTAAA GCAAGGGGCT GACCTTCCTT TTAGCCGATT TATCTCGAAT
CTCGACGACC TCTCGGCGTT GCAATACACA GGTGGCACGA CGGGATTATC GAAAGGTGCC
ATGTTGACCC ACGGCAATAT GCTCGCCAAT GCGGCGCAGG TAAAATCCCG TATCGCGAGC
GTGATCACCG AAGGGGAAGA TATCTTTGTT GCGCCATTGC CGATTTACCA TATTTACGCT
TTTATGGTGA ACTTAGTGCT GTATTTCGAG TGCGGCGGTT GCTCGGTATT AATTCCAAAT
CCGCGTGATA TTAGTGGCTT AATTAAGACA CTCGCCAAAT ACCCCTTCAC GGGATTTGCA
GGACTCAATA CCCTGTTTGT CGCCCTATGC CATCAACCCG AGTTTAAGGC GCTGGACTTT
AGCCACTTAA AAATCACTAT CTCTGGCGGC ACTGCACTCA CTGCCGCAGC GGCGAATATT
TGGCAACAGA CCACAGGCAA TATGATCAGC GAAGGTTATG GATTATCTGA AACCTCACCG
GTGATTTCAC TCAATGCGCC CGGTTATCAA AAGCTTGGCA CTATTGGTAA ACCTGTGATT
GGCACTGAAG TTAAACTCTT AGATGAAAAC AACCTTGAAG TGCCCTTAGG TACAGCGGGA
GAATTAGCCG CGCGTGGCCC ACAAGTGATG CGGGGTTATT GGAATAATCC GCAGGAAACC
GCCAACGCTA TGACTCCAGA AGGTTTCTTT AAAACCGGTG ACATTGCCAT AGCAACAGCG
GAAGGTTTCC ATCAAATTGT GGATCGCAAA AAGGATATGA TCATAGTTTC AGGCTTTAAC
GTTTATCCTA ACGAGGTGGA AAACGTGCTG GCGAGCCATC CAAGTGTGAT CGAATGCGCC
GTGGTGGGAG TAAAAGATGA ACACTCGGGC GAAGCGGTTA AAGCCTTTAT CGTGCTCAAG
GATGATAGCC AAGATCATCA ACAGGCTAAA GAGGCCATTC TAACCTATTG CCGCGAGCAA
TTGACTGCCT ATAAATTGCC AAAAGTCATT GAATTTATGA CGCAATTACC TAAGAGTACC
GTAGGTAAAA TTCTGCGCCG CGAGCTTAAA GATAAAGCTT AG
 
Protein sequence
MAYDQDSQLK LDYSSLVDLI EKTSLRYGDK PAYACLGKTS SFNEIERDSR YFAAYLQNKT 
TLKPGDRIAI QLPNITQFVI AAYGAIRAGL ILVNTNPLYT ERELIHQFND SGAKALVVLS
DLLPTLAKVI DSTQIELVIS THPLDLIDPH VQPKTGLKNV EFCQILKQGA DLPFSRFISN
LDDLSALQYT GGTTGLSKGA MLTHGNMLAN AAQVKSRIAS VITEGEDIFV APLPIYHIYA
FMVNLVLYFE CGGCSVLIPN PRDISGLIKT LAKYPFTGFA GLNTLFVALC HQPEFKALDF
SHLKITISGG TALTAAAANI WQQTTGNMIS EGYGLSETSP VISLNAPGYQ KLGTIGKPVI
GTEVKLLDEN NLEVPLGTAG ELAARGPQVM RGYWNNPQET ANAMTPEGFF KTGDIAIATA
EGFHQIVDRK KDMIIVSGFN VYPNEVENVL ASHPSVIECA VVGVKDEHSG EAVKAFIVLK
DDSQDHQQAK EAILTYCREQ LTAYKLPKVI EFMTQLPKST VGKILRRELK DKA