| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1020 |
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| Symbol | |
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| ID | 5371409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1211697 |
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| End bp | 1212569 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829213 |
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| Product | TonB family protein |
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| Protein accession | YP_001365235 |
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| Protein GI | 152999554 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00268646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACCGA AACGATATCT TGCCTTTGGC GCGTTAACTG TTGCCATCCA AACGGGTGTT
ATCGCCTCGC AGCCTGCTAT CACTATGCTG CAAAGCGCCC AAGCATCGAG TGCAAATCAA
GTATCGAACG CTCCCAGCGC GAATCGTGTC ACCCTCAATT TTTCTGCTGC GACGAGCACG
ACAAGCAGCA ACGCCAGTGT CGAGCCCATA ACGCAAGCAG AATCCAAGCT AGCAAGCGTA
AACAGCACCG CGCGAAAAGT ATCAACAGCG GAATCTGTCG ATAAAACGGT TATCGAGGCT
GTTGAAAAAA CCAAAGCGGA TCAACGAATT GACAGCCAGT TAGTCAAAAA ATCTTTAGCC
GCAAAGCCCA CGACTAAAAG TCATCCAGAT GCAGATCCTT TAGTGACGAA CGCTTTAGCA
CATAAGCGAC CCGAACATGT TGAACAAGAA TTAGAGCTAA AAACAGAGCC CAAAACAGCA
CATGAACTAA CGAATTTAAT CGCTAACGCA GCCGAACTAG ATGCAAAAGC TACCCAGAAT
GTGGCCAGTG CAGCATCTGA CAATGCCCCA TTTAACGACA GCCTCCAAAC GAACATAGTG
GAATTAGCCA AACCGCTGTT TGCTACAGCG CCACCGCAAC CGACTTATCC ACGGATAGCG
CGTAAGAAAG GATTCGAAGG CACTGCAACC ATAGAAGTGA TGTTTAACGA ACTTGGCGAG
CAACTGGCAC TGACGTTAGT CACAAGCTCA GGCTTCAGCC TGCTAGATCA AGCAGCAATC
GCTGCGGTTG AAAACTGGCA ATTTGCGGCG CCGACGCCAA GGTTAGCGAG TCACTACAAG
GTCAGAGTGC CTATTCGTTT CGCGCTTAAC TAG
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| Protein sequence | MTPKRYLAFG ALTVAIQTGV IASQPAITML QSAQASSANQ VSNAPSANRV TLNFSAATST
TSSNASVEPI TQAESKLASV NSTARKVSTA ESVDKTVIEA VEKTKADQRI DSQLVKKSLA
AKPTTKSHPD ADPLVTNALA HKRPEHVEQE LELKTEPKTA HELTNLIANA AELDAKATQN
VASAASDNAP FNDSLQTNIV ELAKPLFATA PPQPTYPRIA RKKGFEGTAT IEVMFNELGE
QLALTLVTSS GFSLLDQAAI AAVENWQFAA PTPRLASHYK VRVPIRFALN
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