Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1010 |
Symbol | |
ID | 5373187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1203598 |
End bp | 1204050 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640829203 |
Product | UspA domain-containing protein |
Protein accession | YP_001365225 |
Protein GI | 152999544 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGATA AGCTTATGCG TACTCAAGAA GTGTTATGCC CTACGGATTT TTCATCCACC GCAGCCCATG CGCTTAAATA TGCGGTTGAA ATGGCTAATC TTTATCATGT CGATATTCGG TTGTTGCATG TGACAAGCCC AGCCCGTGGC GCCCATTGCT ATGGTATTGC GGTCGATATT CCAGCTACAT TGGAAAATGA ACTTCAAGCC TTTGTCGATG CAAAAATGCA AAGTTTGCAG CAGGAAATGC AGCAAGATCT CAACGAGGGA CTCAATATTA AGCTAGTGGT GCGCCATGGT GATGCTATTG ATGAGATTTT AGCGGAAGCC GTTGATGTCG GCATGGTGGT GATTGCCAGT CACGGTAGCA GTGGTTTAGC GGATTTTTTA AAGCCCCATG TGACACAAGA TATTGTTAAG TATGCTAAGT GCCCTGTGCT GGTGGTGAAA TAA
|
Protein sequence | MMDKLMRTQE VLCPTDFSST AAHALKYAVE MANLYHVDIR LLHVTSPARG AHCYGIAVDI PATLENELQA FVDAKMQSLQ QEMQQDLNEG LNIKLVVRHG DAIDEILAEA VDVGMVVIAS HGSSGLADFL KPHVTQDIVK YAKCPVLVVK
|
| |