Gene Shew185_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1006 
Symbol 
ID5371635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1200300 
End bp1200869 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID640829199 
ProductTetR family transcriptional regulator 
Protein accessionYP_001365221 
Protein GI152999540 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATA AGCGCCAAGC CATTCTCGAC ACGGCCTTAG CACTCTTTGT CAGCCAAGGA 
TTTCATGGCA CGTCCACCGC CTCGATTGCT AAGCAAGCAG GCGTAGCAAC AGGTACCTTG 
TTCCATCACT TTCCTTCCAA GGAAGCCTTG ATGGAATCTT TGTTTCTTAC AATAAAACAA 
GAGTTTGCCG ATGTCTTGCT GCTAAACACT CATAAGGGCA GCGATCTTAA GCTCAATGCC 
CTACAACTAT GGCAAAGTGC GATTGATTGG TCGCTGGATA ACCCTGTCAA GCAGCTGTTT 
TTTCAGCAAT ATTCAATGTC GCCCATGATT ACCGCTAAGG TGCGCGACCA GGCGATGAAC 
AGCATCTTAG GCTTTATTAG CGAACTGATT AAGCAAGGAC AAATAGAAGG ATTAATCGCC 
TACTACCCGC TGGAGCTGAT GCTAGAAAAC TGCCATGGCC AATATCTGGC GGCAACCCGA 
TTTTTTATTG ATAACCCGCA CTTAGGTACG AATGCAAGGT ACCGCGATGC CAGTTTTGAA 
CTGTTTTGGA AGGCCATGCA AGCGGACTAA
 
Protein sequence
MTDKRQAILD TALALFVSQG FHGTSTASIA KQAGVATGTL FHHFPSKEAL MESLFLTIKQ 
EFADVLLLNT HKGSDLKLNA LQLWQSAIDW SLDNPVKQLF FQQYSMSPMI TAKVRDQAMN 
SILGFISELI KQGQIEGLIA YYPLELMLEN CHGQYLAATR FFIDNPHLGT NARYRDASFE 
LFWKAMQAD