Gene Shew185_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1005 
Symbol 
ID5371634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1199323 
End bp1200129 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content50% 
IMG OID640829198 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001365220 
Protein GI152999539 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTT TAGTCTTTTT GGGTCTATTG CTGTTAAGCA TGTCGGCCTG TAGCTTGATC 
CCAAAACCCG ATTTAAATAT CACGTCTGCC GAGGTTAACC CCTTGAGTGA AGTGATGCGT
GGGCTACAGA CTCAACCTGG CCCTAAGTTT CCCATCCCAG TAGCCGTGTA TTCCTTTCGC
GATCAAACTG GCCAATATAA ACCACAGGCG AACGTGAGTT CGTTTTCGAC TGCGGTGACT
CAGGGCGCAA CCTCGATGTT GATGCAGACC TTGCTCGATT CTAAATGGTT TACCCCAGTA
GAACGTGAAG GGCTACAAAA CCTGCTGACT GAGCGCAAAA TTAGTAATAA ACAGAGCGGT
ACTAAGGGTG ATGATGTGCC CGTATTATCC ACCGCCAGAT TGTTACTCGA AGGTGGCGTC
ATTAGCTATG AGACTAACAC CAGCACAGGC GGTAGCGGTG TCGAATACTA CGGCATTGGC
GCTTCGGAAA TGTACCGTGA AGATCAGGTG ACCATTTATC TGCGCGCCGT CGATGTGCAC
ACAGGTAAAG TGATGATGTC GGTCTCGACC AGCAAACGTG TTTTATCCCA AGAAATGCGC
GCGGGCTTAT TCCGTTACAC TAGTTTAAAT CGCCTCGCTG AAGCAGAAAT TGGTTTTACC
ACCAACGAGC CAGTGCAGTT TTGCGTGTTG CAAGCCATTG AACTGGCTGT CGCTGAGCTG
ATTGATAAGG GCATTAAGCA AGGCTACTGG AGTCCAACTC AAGTCACCCA GCCAGTCGAG
AAAGCGCAGG AGTTGAGTCA GAGTTAG
 
Protein sequence
MARLVFLGLL LLSMSACSLI PKPDLNITSA EVNPLSEVMR GLQTQPGPKF PIPVAVYSFR 
DQTGQYKPQA NVSSFSTAVT QGATSMLMQT LLDSKWFTPV EREGLQNLLT ERKISNKQSG
TKGDDVPVLS TARLLLEGGV ISYETNTSTG GSGVEYYGIG ASEMYREDQV TIYLRAVDVH
TGKVMMSVST SKRVLSQEMR AGLFRYTSLN RLAEAEIGFT TNEPVQFCVL QAIELAVAEL
IDKGIKQGYW SPTQVTQPVE KAQELSQS