Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1004 |
Symbol | |
ID | 5371633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1198928 |
End bp | 1199323 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829197 |
Product | curli production assembly/transport component CsgF, putative |
Protein accession | YP_001365219 |
Protein GI | 152999538 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATACA GGACGTTACT TGCCCTTGTC ACGCTATGTG TGGCAAGCAG TGGCCAAGCC ACTGAATTGA TTTACACGCC AGTGAATCCC AGTTTTGGCG GCAATCCACA AAATGGGGCT TTTCTATTAA ATAAAGCCCA AGCGCAGAAT GACAATAAAT CCAACTCGAC CGAGAAGGAC TTTGTTACCC GTTTTAAAGA ATCTCTAGAG CGTAACATCA TCAACTCGAT CACCCGCGGT GTCGCTGATG GCGAAATCAC CGATGGTGTA TATGATACCG GTGATTTTCG CATTGAAGTG GCATCGACAG GAAATGGCGT GATGTTGACC ATCACGAATA CTGAAACCGG TGAAATCACA GTGATTGAAA TGCCGACGTT TGGAGGTATC AACTAA
|
Protein sequence | MTYRTLLALV TLCVASSGQA TELIYTPVNP SFGGNPQNGA FLLNKAQAQN DNKSNSTEKD FVTRFKESLE RNIINSITRG VADGEITDGV YDTGDFRIEV ASTGNGVMLT ITNTETGEIT VIEMPTFGGI N
|
| |