| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1003 |
|---|
| Symbol | |
|---|
| ID | 5370901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1198507 |
|---|
| End bp | 1198917 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640829196 |
|---|
| Product | curli production assembly/transport component CsgE, putative |
|---|
| Protein accession | YP_001365218 |
|---|
| Protein GI | 152999537 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACAGT TAAAACAGCG TCTGCTTACT TACGTTTTAT GTCCATTCCT GCTGCTGGCT
TCCCCTATCA CTCTTGCCGA CAACGACATT GAAATTAGTG GCTTAGTGAT AGATAGAACC
TTGACTCGGT TTGGTAAGGA TTTTGGCTTC TACTACTCAA GCTATTGGCG CGAGCTGCCC
TTTACCCAAG GCTTTAACGT GACCTTGTAT GAGACAGTGT TTCCGCAGGC GGGGACGGTT
TTAAGCTTAG AAGTCAACGG AACACGGATT TACACTACCC ATTTTGGTCG TCGTGCAAAT
CCGGTTAAAG AGAGTGCAGA GCAGGCGATT TTGATCACGA TTGATTATTT AGCGCAAGTC
AGAGCCAATG CAATAACAGG TGATTTTTCA GGAACATCGG ACGACTTTTA G
|
|---|
| Protein sequence | MKQLKQRLLT YVLCPFLLLA SPITLADNDI EISGLVIDRT LTRFGKDFGF YYSSYWRELP
FTQGFNVTLY ETVFPQAGTV LSLEVNGTRI YTTHFGRRAN PVKESAEQAI LITIDYLAQV
RANAITGDFS GTSDDF
|
|---|
| |