Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0998 |
Symbol | |
ID | 5371041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1191509 |
End bp | 1192252 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829191 |
Product | ABC transporter related |
Protein accession | YP_001365213 |
Protein GI | 152999532 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATCAA TGAAGAGTGT GAGCAAGGTT TTTAAAACGG ATTTAGTGGA AACCCACGCC CTGCGCGATT TTAACCTCGA AGTGAATGAA GGCGAGTTTG TTGCGGTCAC GGGTCCTTCT GGCTCAGGTA AAACGACTTT TTTAAATATC GCGGGTTTGC TCGAAGGTTT TACCCACGGT GACTATTTTC TCGATGGCAT TAACGTGTCT AACCTGAGCG ATAACAAGAG CGCTGCTATC CGTAACGAGA AAATCGGCTT TATCTTCCAA GGCTTTAACT TAATTCCTGA CCTTAACTTG GCAGAAAATA TCGAAGTGCC GCTGCGCTAC CGTGGTTTTA ATGCCAAGGA ACGCCAACGC CGCGTACAGC AAGCATTAGA ACAAGTGGGT TTAGCTTCAC GACTCAAGCA TTTTCCCACT CAGCTTTCGG GCGGACAGCA ACAAAGAGTG GCGATTGCCC GTGCTTTGGC GGGTGAACCC CGCTTCCTGC TCGCCGATGA ACCGACAGGT AACCTCGACA GCTTAATGGC GCGCCAAGTG ATGGAATTAC TTGAAAATAT CAACCAAGCG GGCACCACCA TCATCATGGT GACCCATGAC CCCGAACTCG CTCGCCGCGC CCAGCGCAAT ATTCAAATTG TCGACGGTCA AGTGTGTGAT TTTACTATGT ATCAGCCCCA TGGCAGTGTG CAAACTGCGG CGACCCCGCA CCCATTAGAC AAACTTGTCG CCAACGCTGA CTAA
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Protein sequence | MLSMKSVSKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG DYFLDGINVS NLSDNKSAAI RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFNAKERQR RVQQALEQVG LASRLKHFPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV MELLENINQA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPHGSV QTAATPHPLD KLVANAD
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