Gene Shew185_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0998 
Symbol 
ID5371041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1191509 
End bp1192252 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID640829191 
ProductABC transporter related 
Protein accessionYP_001365213 
Protein GI152999532 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATCAA TGAAGAGTGT GAGCAAGGTT TTTAAAACGG ATTTAGTGGA AACCCACGCC 
CTGCGCGATT TTAACCTCGA AGTGAATGAA GGCGAGTTTG TTGCGGTCAC GGGTCCTTCT
GGCTCAGGTA AAACGACTTT TTTAAATATC GCGGGTTTGC TCGAAGGTTT TACCCACGGT
GACTATTTTC TCGATGGCAT TAACGTGTCT AACCTGAGCG ATAACAAGAG CGCTGCTATC
CGTAACGAGA AAATCGGCTT TATCTTCCAA GGCTTTAACT TAATTCCTGA CCTTAACTTG
GCAGAAAATA TCGAAGTGCC GCTGCGCTAC CGTGGTTTTA ATGCCAAGGA ACGCCAACGC
CGCGTACAGC AAGCATTAGA ACAAGTGGGT TTAGCTTCAC GACTCAAGCA TTTTCCCACT
CAGCTTTCGG GCGGACAGCA ACAAAGAGTG GCGATTGCCC GTGCTTTGGC GGGTGAACCC
CGCTTCCTGC TCGCCGATGA ACCGACAGGT AACCTCGACA GCTTAATGGC GCGCCAAGTG
ATGGAATTAC TTGAAAATAT CAACCAAGCG GGCACCACCA TCATCATGGT GACCCATGAC
CCCGAACTCG CTCGCCGCGC CCAGCGCAAT ATTCAAATTG TCGACGGTCA AGTGTGTGAT
TTTACTATGT ATCAGCCCCA TGGCAGTGTG CAAACTGCGG CGACCCCGCA CCCATTAGAC
AAACTTGTCG CCAACGCTGA CTAA
 
Protein sequence
MLSMKSVSKV FKTDLVETHA LRDFNLEVNE GEFVAVTGPS GSGKTTFLNI AGLLEGFTHG 
DYFLDGINVS NLSDNKSAAI RNEKIGFIFQ GFNLIPDLNL AENIEVPLRY RGFNAKERQR
RVQQALEQVG LASRLKHFPT QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLENINQA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTMYQPHGSV QTAATPHPLD
KLVANAD