| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0996 |
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| Symbol | |
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| ID | 5371196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1189759 |
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| End bp | 1191066 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829189 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001365211 |
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| Protein GI | 152999530 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCTCCG GCACTGATGA TTCCGACAGG GAAGCGAGTA AAGCCATGAT TAAAGATACT
AGCGGCCAAG ATACCGTACT TGTGCCATCG TCCACTAAAC GTCTTAAGTT ACCTCTGTTG
ATCGGCGGTT GCGCCTTATT AGTCAGCGCC TTAGTGTGGG CTAGCTTGGG CACAGATAGC
GTGAGCAAAT CCTTAAGCCG CAGCGACATC ACTACCGCAA CACTCTTTGT TGGAACGTTA
ACCCGTGATG TTGCGACCAC AGGTAAAATT GTGGCGGCGA ATGCGCCTAT TTTGTATAGC
ACAGAGGAAG GCACAGTCAC TCTGCTGAGT AACCCTGGCG ATAGCGTCGA TAAAGGCGAT
GTGGTTGCCA AACTCGATAG CCCAAGATTA TCCAATCAGT TGGAGCAGGC TAAGTCGATT
TTGGCGGGAA TGCAGAGTGC GTTAGAGCGC GCCAAGTTGG ACGCCAGACG CGGTCAACTG
CAAGTGAATC AAACCTTAGA CATGGCCGCG GTTGACCTAG AAGCCGCCAA CAGAGAACGT
CGCCGGGGTG AGTTGTTAAT TAAAAATAAG CTGATCAGCG AAATCGATTA CGAAAAAGGC
AAAGACGAAT TACACAAGGC TAAACTCAAG TTTGCCCATG CCGAGCAGGA AGTCGCGCTA
ACAAAAGACA CCCTAACCTT TGAAGTTAAA AACAAAGCAT TAGAAGTCGA GCGCCAAACC
CTAGCCGTGC ACGAACTCGA ACGCCAAGTT GATGCCTTGA ATATCAAAGC CCCCGTAGGC
GGCATTATCG GCAACTGGAT CACCGAGCAG AAAACCCGTC TTAGCGCTAA CCAACCGATT
CTAACCGTTG TGGATTTAAG CGCCTATGAG GCCGAACTGG CTGTGCCAGA GTCCTACGCC
GACGATCTGG GTTTAGGGAT GGAGGTTGAG CTCAGTTTCG GCAGCGTGAA GTTAATGGGC
AAGTTATCGT CCATCTCCCC CGAAGTACGT AACCGTGAAG TGACCGCAAG AGTGCAGTTC
GTTCAAGATA ACAGCTTGAA ACTGCGTCAG AACCAACGTA TCTCCGCCCG AGTCTTGTTA
GAGCACAGAC CCGATGTGTT GATGGTGAAA CGCGGCGCCT TTATGACCAG CGGCGGTGGC
GATGAGGTGT ACCAAATCGA GGGCGATCTA GCCAGCCGCC GCGCGATCAA ACTCGGCAGT
ACGAGCCTGA GCCAAGTCGA AGTGCTGGAT GGCGGCAAAG CCGGAGACGA GTGGGTGATA
TCCAGTGTCG AGCCCTTTAA TCACGCCGAA CAGGTCAGGA TTCATTGA
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| Protein sequence | MRSGTDDSDR EASKAMIKDT SGQDTVLVPS STKRLKLPLL IGGCALLVSA LVWASLGTDS
VSKSLSRSDI TTATLFVGTL TRDVATTGKI VAANAPILYS TEEGTVTLLS NPGDSVDKGD
VVAKLDSPRL SNQLEQAKSI LAGMQSALER AKLDARRGQL QVNQTLDMAA VDLEAANRER
RRGELLIKNK LISEIDYEKG KDELHKAKLK FAHAEQEVAL TKDTLTFEVK NKALEVERQT
LAVHELERQV DALNIKAPVG GIIGNWITEQ KTRLSANQPI LTVVDLSAYE AELAVPESYA
DDLGLGMEVE LSFGSVKLMG KLSSISPEVR NREVTARVQF VQDNSLKLRQ NQRISARVLL
EHRPDVLMVK RGAFMTSGGG DEVYQIEGDL ASRRAIKLGS TSLSQVEVLD GGKAGDEWVI
SSVEPFNHAE QVRIH
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