Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0983 |
Symbol | |
ID | 5370671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1176392 |
End bp | 1177219 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829177 |
Product | periplasmic binding protein |
Protein accession | YP_001365199 |
Protein GI | 152999518 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGC GCCACTTCGC TGGACTCGTT TTTGGGCTCA GCTTGTTTCT TCCCCACGGC GTGTTGGCCG ATCCCGCTAA ACGCATCATT GCGCTCTCGC CCCACGCGGT AGAAATGCTC TACGCCATAG GCGCGGGCGA TGCCATAGTG GCCGCAACCG ATTATGCGGA TTATCCCGAG GCGGCCAAAA AAATCCCGCG TATTGGCGGT TACTATGGCA TTCAAATGGA GCGGGTGATG GAGCTTAATC CCGATCTGAT TGTGGTGTGG GATACGGGCA ATAAAGCTGA AGATATCAAT CAACTTCGAA CGCTGGGGTT TAACCTTTAT GGGAGCGATC CAAAAACCTT AGAAGGGGTT GCCAATGAAC TGGAAGAGCT AGGTAAATTA ACTGGCCACG TTGAAGAGGC GAGTAAGGCC GCTGCTGCGT ATCGCGCCGA ACTTATCCGT TTACGGACTG ATAATGCCAG TAAATCAGAG CCTAAAGTGT TTTATCAACT CTGGTCTACG CCCTTGATGA CGGTTTCTAA AAACAGTTGG ATCCAACAAA TCATCAGTGT CTGTCATGGC CAAAATGTGT TTTACGATGC CGCCAGTGAT TACCCGCAGG TGAGTTTAGA AAATGTGTTG CTGACCTTGC CCGAGGTGAT TTTGCAGAGC CAAGAAGAAG GCAATGTTAA AGGTGTCGAT TGGAGCCAAT GGCCCGAAAT TCCCGCCGTT AAAAAACAGC ATATTTATCA ACTCAATGCC GATTTATTAC ATCGCGCGAC GCCCAGAGCC TTACTCGGCG TTCAAGCCTT ATGTGATGCC TTGGATAAAG CGCGTTAA
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Protein sequence | MIKRHFAGLV FGLSLFLPHG VLADPAKRII ALSPHAVEML YAIGAGDAIV AATDYADYPE AAKKIPRIGG YYGIQMERVM ELNPDLIVVW DTGNKAEDIN QLRTLGFNLY GSDPKTLEGV ANELEELGKL TGHVEEASKA AAAYRAELIR LRTDNASKSE PKVFYQLWST PLMTVSKNSW IQQIISVCHG QNVFYDAASD YPQVSLENVL LTLPEVILQS QEEGNVKGVD WSQWPEIPAV KKQHIYQLNA DLLHRATPRA LLGVQALCDA LDKAR
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