Gene Shew185_0977 details

Gene Information

• Locus tag: Shew185_0977
• Symbol: cobT
• ID: 5369768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 1170129
• End bp: 1171211
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640829171
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_001365193
• Protein GI: 152999512
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCAGT CAGCCGTGTC TTTTCAAATC AGCCCTGTGA GTAAAGCGCA GGATCCGCTG 
ATCCAGCAGA AAATTGATCT TAAGACTAAG CCGCCCGGCG CCTTAGGTCA GCTCGAATCC 
TTAGCCTTAC AGATTGCCCG CGTGCAAGCG ACTGATTCAC AACAAGCGGA TCAGCCACAA 
AATACTGTGC TGAAAATCGT TCATCCGACC ATGTTAGTGT TTGCGGGTGA CCATGGTATT 
GTCGCTGAAG GCGTGTCGAT TGCCCCTAGC GAAGTAACGC GCCAAATGGT GCAAAACTTT 
GCCCATGGCG GCGCGGCGAT TAACGTTTTT TGTCGGCAGG TGGGCTTTAA GCTCGAAGTG 
ATCGATTGCG GCATTTTAAC GCCAGTCGAA GGGGTTGAAG GCATTATCGA TCAACGTCTT 
GGCGCGGGCA CAGGGGCAAT TCATTTAGAG CCCGCAATGG CGCTGGAAAC CGTCGATAAA 
GGCTTTGCGA TGGCGCGCGA TTTGATTGAA CGTCACCATC AAGCAGGTTG TAACTTAGTC 
GCCTTTGGCG AAATGGGCAT AGGCAATACC TCAGCGGCGG CGGCCATTAT GGCGGCGATC 
ATGCAGCTGG ATGTGATTGA TTGTGTCGGC CGAGGCACGG GCATTAATAG CGAAACCTTA 
GAACGTAAAT TGATGCTGAT TGAGCTTGCG TTATTGCTGC ATCAAAGCGC CTTAACTGGG 
CCTAAGTCAG TGTTAGCTTG CCTAGGAGGT TTTGAAATTG TGCAGATGAC GGGAGCTATG 
TTAGCTGCCG CCGAGCGTAA AATGCTGGTG GTCGTGGACG GTTTTATCGC GACAGCGGCA 
GCATTAGTCG CGGTGCAAAT CGCCCCCAAT GTGCGTGATT ATTTGATTTT TGCCCACCAG 
TCAGACGAGC AAGGCCATCA GCGGATGTTA GAGTTTTTGC AGGCGAAACC TTTATTATCC 
CTCGGGCTAA GATTAGGCGA AGGTACGGGC GCAGCTTTGG CGTTGCCGCT TATTCAAGCC 
TCAGTAAATT TTTACAATCA AATGGCGAGT TTTAGTGATG CGGGGATTGA GGCTGTTGTA 
TGA 

 

Protein sequence

MSQSAVSFQI SPVSKAQDPL IQQKIDLKTK PPGALGQLES LALQIARVQA TDSQQADQPQ 
NTVLKIVHPT MLVFAGDHGI VAEGVSIAPS EVTRQMVQNF AHGGAAINVF CRQVGFKLEV 
IDCGILTPVE GVEGIIDQRL GAGTGAIHLE PAMALETVDK GFAMARDLIE RHHQAGCNLV 
AFGEMGIGNT SAAAAIMAAI MQLDVIDCVG RGTGINSETL ERKLMLIELA LLLHQSALTG 
PKSVLACLGG FEIVQMTGAM LAAAERKMLV VVDGFIATAA ALVAVQIAPN VRDYLIFAHQ 
SDEQGHQRML EFLQAKPLLS LGLRLGEGTG AALALPLIQA SVNFYNQMAS FSDAGIEAVV