| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0958 |
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| Symbol | |
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| ID | 5373045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1137657 |
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| End bp | 1139300 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640829152 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001365174 |
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| Protein GI | 152999493 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGTAC TGCTAAAAAA ACTTCAACTG ATCTATTTTC CCTTCTTATT CACGAGCCTG
TTATTTATCT CTGGCTACAG CTTAATCCAT TGGCTGTTGT TGATTAAATT TGAGTTTTTT
AGCTTAGATG AAGATCTGGT CAATTTGGGA TTACCGCTGA TACTGTCATG GCTCTTGTTG
CTTGTTTTTC TGAGGCCAAG GCTAAAACTG CTGAAGTTTG TTAAGGATAA TTCACGCTTT
TACTATCTAC TTTTCGCCGT GCAGCTCGTG GCTGTGCCTT GTATTATTGC GCAGGAATAT
CTTAAAACAG CAACGGGTCA GTTAACCCAA TTAGCATCGA TCCAAGAATT GTATCTGCAT
AAAAAGACAC AGTATTACCA GTTACAGCAA GCTTATATTG ATAAGGCGCA AATTGGTGTG
CAACGAAAGA TTGAGGTTAC AGGAAAAAGT AACAGTCACT TGAATATGAC GCTCTATATT
GCGATGCCGA TTTTTGCGAG TGGCGCCGAT CGTCGCCGAA CTTCTGTCTT AGCCTGGTAT
GGTAAAACTT ATCAGCAGGA GATCAGTAAT AGACTCGAAC CCGATGAAAA AGAACAAGCA
TACAAGGCGT TTTTGACTCA ATCCCAACGT GAGTTTGATC AGTTTGACCC GCAAACGTTT
GTTTACCTTG AACGGTTAGC CCCTTCGTCG CTGCAGAGAT ACTTACTTAG TGCAGCGGAA
AAAAGTCCGC TTTATCAAGC TGAATACCCA ACGATTTTTA TGCCGAAGTT TGAGCCATTT
GAAGCCCGTA ATGGCAATAA ACTCGCTTGG ATGCTGGTTT GGTTTGTTGC AGGTGCTTTA
GTCTGGTTTG TGTTCTTGCT ACGGGTGAAA CTGGATGAAG AAGCGCTTAA AGCTGAAACA
GTTACAAAGC GTTTGAACCA TGCGGGCACA ATCGCCGAGC TTAACGATTT TTTTGAAATG
ATACGGCCCA AGCCGGGTTT TATTGCAACT CCTATTCTGA TGTATCTCAA TGTTTTAGTG
TTTATCCTTA TGGCTTGGTC AAGCCAACAT TTTATTAATT TACAGGGTAG TTTCATGCTC
GAATGGGGGG CTAACTTTCG ACCTAAAGTG CTTGCTGGTG AGTGGTGGCG CTTAATCACG
AGTACCTTTA TCCATGGCGG TTTAGCCCAC TTAGCGCTGA ATCTTTACGG CTTGTTTTTT
GTCGGCAGCT TTCTTGAACC TGTACTCGGT AAGTGGCGAC TATTTTTGGC GTATTTGATC
ACTGGGGTAT TGGCGAGTAT CGCCAGTATC TGTTGGTATG ATGCCACTGT GAGTGTCGGT
GCATCGGGCG CCATTATGGG GCTATTAGGA ATACTCGTGA TTTGGGCTTG GAAAAAGATT
TTCCCTGAGG ATATCAACTG GGTACTGAGT ATTAACTTGG CATTTTTTGT GACCATAAGT
CTTGTCGCAG GATTATTGGG TGGAGTGGAC AATGCTGCCC ATATTGGCGG ATTGCTGAGT
GGGTTAGGGT TGGGTTACCT TTCGCTGCGC TATGCTCGAG GTGCTCAGGG GGATCGAGGT
GCTCAGGGGG CTCGAGGTGC TCAGAGAGCT CGGAAGATTG AGGGCCATAG CCCAGCTAAA
AAACGTAAGC CGAGACGCAA ATAA
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| Protein sequence | MAVLLKKLQL IYFPFLFTSL LFISGYSLIH WLLLIKFEFF SLDEDLVNLG LPLILSWLLL
LVFLRPRLKL LKFVKDNSRF YYLLFAVQLV AVPCIIAQEY LKTATGQLTQ LASIQELYLH
KKTQYYQLQQ AYIDKAQIGV QRKIEVTGKS NSHLNMTLYI AMPIFASGAD RRRTSVLAWY
GKTYQQEISN RLEPDEKEQA YKAFLTQSQR EFDQFDPQTF VYLERLAPSS LQRYLLSAAE
KSPLYQAEYP TIFMPKFEPF EARNGNKLAW MLVWFVAGAL VWFVFLLRVK LDEEALKAET
VTKRLNHAGT IAELNDFFEM IRPKPGFIAT PILMYLNVLV FILMAWSSQH FINLQGSFML
EWGANFRPKV LAGEWWRLIT STFIHGGLAH LALNLYGLFF VGSFLEPVLG KWRLFLAYLI
TGVLASIASI CWYDATVSVG ASGAIMGLLG ILVIWAWKKI FPEDINWVLS INLAFFVTIS
LVAGLLGGVD NAAHIGGLLS GLGLGYLSLR YARGAQGDRG AQGARGAQRA RKIEGHSPAK
KRKPRRK
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