| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0949 |
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| Symbol | |
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| ID | 5372260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1129864 |
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| End bp | 1130589 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829143 |
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| Product | ABC transporter related |
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| Protein accession | YP_001365165 |
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| Protein GI | 152999484 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTAAAA TAACCAACCT GCATAAAAAC TTCGGCGATA ACAAAGTGCT CAAGGGCATT
AGCGAGCATA TTCGTCAGGG CGAAGTGGTG AGTGTGATCG GCCCAAGTGG CAGTGGCAAG
AGCACCTTTT TGCGTTGTAT TAATCTGTTA GAGCAGCCAA GCCAAGGCGA TATCGAGATT
GAAGGTCAAT TGATCACAGC GCCAAACGCC TGCGTCGATA AACTGCGGCA AAAAGTGGGC
ATGGTGTTTC AAAACTTTAA CCTGTTCCCC CATAAAACCG TCATTCAAAA CATCACCTTA
GCACCCATCA GCCTAAAACT GATGACGCCA GCTCAGGCCG AAACGAAAGC CCTCGACCTA
CTGGCACAGG TTGGCTTGAG TGACAAAGCC AATGCCTATC CCGCTAGTTT ATCGGGCGGC
CAAAAGCAAA GGGTCGCCAT TGCCCGCGCA TTAGCGATGG AACCAGACTT GATGTTATTT
GATGAGCCGA CATCGGCACT CGACCCAGAA ATGGTCGGCG ATGTGCTAGA CGTGATGAAA
GACTTAGCGC TAAAGGGCAT GACCATGGTC ATTGTCACCC ACGAAATGGG TTTCGCACGG
GATGTATCCG ATAGGGTGAT CTTTATGGAC GGCGGTTATG TGGTCGAATC GAGCCCACCA
GATGAGCTAT TCACCAATCC CAAAGAAGCC CGTACCCAAG CGTTTTTAAG CAAGGTACTG
CGCTAG
|
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| Protein sequence | MIKITNLHKN FGDNKVLKGI SEHIRQGEVV SVIGPSGSGK STFLRCINLL EQPSQGDIEI
EGQLITAPNA CVDKLRQKVG MVFQNFNLFP HKTVIQNITL APISLKLMTP AQAETKALDL
LAQVGLSDKA NAYPASLSGG QKQRVAIARA LAMEPDLMLF DEPTSALDPE MVGDVLDVMK
DLALKGMTMV IVTHEMGFAR DVSDRVIFMD GGYVVESSPP DELFTNPKEA RTQAFLSKVL
R
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