Gene Shew185_0905 details

Gene Information

• Locus tag: Shew185_0905
• ID: 5371286
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 1073911
• End bp: 1074591
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640829100
• Product: response regulator receiver
• Protein accession: YP_001365122
• Protein GI: 152999441
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4565] Response regulator of citrate/malate metabolism

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATACAG TGATCATCGT CGAGGATGAA GTCGAAGTCG CCCATTTGGT TGCGCAATAT 
TTGTTCTCGA CCAATCGTTA TAAAGTGATT GGCATGGCCA GCGATATCAG TACCGCGCGG 
TCTTTATTGG GCGCCATCAC GCCGGACCTC TTACTGCTAG ACGTGTATTT ACCCGACGGT 
AATGGTTTGA ATTTACTGGC AGAATTACGC AGCCAAGGGA TCCGCAGCGA AGTGGTATTG 
CTCACTGCGG CCAAGGAAGT GCAGATTTTA GAAAAAGCCA TGCAGCTGGG CGTGTTCGAT 
TTTCTGGTGA AACCTGTACT GTTGAGCCGG TTAGACCAAG CTTTGAGTCG ATTTGAGAGT 
CGCCAGCTCA AACTTTCTGC CACAGAAGAG CTGACTCAAT CCGTGGTCGA TGCCTTTATG 
GAAGTGCCGA CAGGGACGAC CAAGGCTGCC GCTCGTTTGC CAAAGGGGGT CGATCAATTG 
ACCCTACAGA AAATCCGTGA AGTGTTTGAT GCTAAGCCGC AGGATAAACT CACGGCGCAA 
ATGGTGGGTG AAAAGCTAGG CGTTAGCCGT TCTACTGCGC GGCGTTATTT AGAGTTTTTG 
TTGGAATGCA ATGAGCTGGC GGCGGACCAA AGTTATGGCT CCATCGGCCG CCCCGAACGT 
TGCTACCACA GAGTGCGCTA G 

 

Protein sequence

MHTVIIVEDE VEVAHLVAQY LFSTNRYKVI GMASDISTAR SLLGAITPDL LLLDVYLPDG 
NGLNLLAELR SQGIRSEVVL LTAAKEVQIL EKAMQLGVFD FLVKPVLLSR LDQALSRFES 
RQLKLSATEE LTQSVVDAFM EVPTGTTKAA ARLPKGVDQL TLQKIREVFD AKPQDKLTAQ 
MVGEKLGVSR STARRYLEFL LECNELAADQ SYGSIGRPER CYHRVR