Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0899 |
Symbol | |
ID | 5370994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1066496 |
End bp | 1067308 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640829094 |
Product | hypothetical protein |
Protein accession | YP_001365116 |
Protein GI | 152999435 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCTA TGGCTAGCAA AGGCAATGGC ATTACTTTTA TCAGTGCACA AACCTCGATT GAGGGTGACA TCCAGTTAGA GAGCACGGCA TTAATTGCGG GTAAATTGCA GGGCAAGATT GGTTCAGCGG GACAAATTAA GATCGAACTC GGCGGCGAGA TCTCCGGTGA AGTCAGCTGT GATGAGTTGC GGGTGTGCGG CGTATTTAGT GGTCGAGTCT GTTGTAATAA GTTGATTATT ACCAGTTCTG GAGTGGTTGA CGGTGAAGTT GCTAGCCATC AGATGGAGAT TTACGAAGGC GGCCAGTTTA TTGGTCAGCG GATTAAAGGC CCTGAGCTTG ATGCCTTGCC TGACATGCTA AAAGCGATCG AGCCAGCGGC TCAACGCTCG GATGCGCACC TATATGCCAG TGAGAGCGGT TCATTAAGAG GCGATAATCG GGCGATTCGT CCTTGGTTGT ATGTTGCTGC GGCAACTGTT GTCATCGCCT TGGGCTTTAG TTTTGGACCC GAGCAATTGC GTGAGTGGTT ACCGAATGTG AGTGATAGCC CGCTCAATAC TGAAGTGTCT CCCGTGACTC AGGAGCTGGA TGTTGAAAAG GGTTTCAATC CATTACTGAC TGAGCAAACG ACTGCCCCAG ATACCGCGAA TGCCGACAAT ACGGCGGCGG TATCCGCAGA TCCCGATCCG CTGGCTTTAT CGCAGGATTC GGCGATGGAA GATTTACAGC AAATGGAACA AGGTCATGCA CAGATGGCGC AGGGTGATAA TGGCACCGCG CCCGCCAGCG AGAATGCAGG CAATAAGCTC TGA
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Protein sequence | MNPMASKGNG ITFISAQTSI EGDIQLESTA LIAGKLQGKI GSAGQIKIEL GGEISGEVSC DELRVCGVFS GRVCCNKLII TSSGVVDGEV ASHQMEIYEG GQFIGQRIKG PELDALPDML KAIEPAAQRS DAHLYASESG SLRGDNRAIR PWLYVAAATV VIALGFSFGP EQLREWLPNV SDSPLNTEVS PVTQELDVEK GFNPLLTEQT TAPDTANADN TAAVSADPDP LALSQDSAME DLQQMEQGHA QMAQGDNGTA PASENAGNKL
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