| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0896 |
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| Symbol | |
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| ID | 5370785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1061437 |
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| End bp | 1062435 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829091 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001365113 |
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| Protein GI | 152999432 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGC GTTCGTCATC GACTCAGCTT AAATTGCGGC ACTTGAGTTT CCGTTTACTG
CAGGTGTATG TGCAAGTGGT GCGGTTAGGC AATATTTCCG CAGCGGCGAG GGCCTTGCAT
TTAACCCAAC CCACAGTGTC ATTACAGCTT AAAAAGCTAG CCGATGTGTT AGGTGAACCG
TTACTCGAGA GTCGTGATGG CCGCATGCTA CCGACCTTGA TTGGCAATGA ACTCTACCGC
GCAGCCTGCG ATACCTTGAG TCGTTTTGAG GATTTCGATG CCTTTATGCA GCAGGCTAAA
GGTGGCAGCG TCGGTCACAT TAATATCGGT ATCGTCACTA CCGCCAAATA CGTGTTACCA
CGGATTTTAG GGGCTTTTTA TCGGCAGTTT CCGCAGGTTA AAGTGACCTT AAATATAGGT
AACCGTGCCC ATGTATTAGG CCGATTTGAG CGCCAAGAAG ATGATTTATA TTTGTTTAGT
CATCCACCTA GTGGCGATAA CGTCTTATCT GCGCGGATCA TTAAAAACCC GCTGCAATTG
ATTGCGCCAA AGGATCATTG GGCGGTGGGC CGTGAACAAG TAAATTTTAA CGATCTTAAA
AATGAGCGTT TTATCGTGCG CGAGCCAGGT TCTGCCACCC GCTTGATGTT TGAGTCTTGG
TGCAGCGGTC AAGGCATCAC GCTTAGTGAC ACTATGCAAA TTGAGAGCAA TGAGGCGATA
CGCCTAAGCG TCGCGTCTGG CTTAGGCTTG TCGGTGATTT CGGCGCACAC GCTGCAAGAA
GGGCGCGAAA AACCGGCAAT TTTGCCAGTG ATGGGTTTTC CGCTCGAAAG TAACTGGTAT
CTGGTTGGCC GCAAAGATCG CCGCTTGCCC TATGCTGCCA TGCAGCTGGT GGACTTTATG
GCGGCGCATT TGGCCGAGTG TATCGAGCCA GAATGGGTTG CCGCCGATAT CAGTGAACTG
GCTATGCACT TTAATCATGC GCCGCAAACT CGGTCTTAG
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| Protein sequence | MDKRSSSTQL KLRHLSFRLL QVYVQVVRLG NISAAARALH LTQPTVSLQL KKLADVLGEP
LLESRDGRML PTLIGNELYR AACDTLSRFE DFDAFMQQAK GGSVGHINIG IVTTAKYVLP
RILGAFYRQF PQVKVTLNIG NRAHVLGRFE RQEDDLYLFS HPPSGDNVLS ARIIKNPLQL
IAPKDHWAVG REQVNFNDLK NERFIVREPG SATRLMFESW CSGQGITLSD TMQIESNEAI
RLSVASGLGL SVISAHTLQE GREKPAILPV MGFPLESNWY LVGRKDRRLP YAAMQLVDFM
AAHLAECIEP EWVAADISEL AMHFNHAPQT RS
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