Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0892 |
Symbol | |
ID | 5370654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1055062 |
End bp | 1056036 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829087 |
Product | hypothetical protein |
Protein accession | YP_001365109 |
Protein GI | 152999428 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000294447 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGGAA TGCTAACCCG TGTTCTCACA TCGATCCTCT TTTTAGCCGT TATGCTGTCG CTGACGGGTT GTGGCGATGA GAGACCGGAT AAAATCGCGA AGTATCAACA ACTCACGCAG CAACGCCTCG CAACGCTCAC GACGATGATC GATGACGGGC AGTTGCGTAA CGCTAACCTC TTAAAACAAT ACACCACACT GTTAAAGCAG CAGAAACCTG ATTTAGCCCC ATTACTTGAT GAATTAGCAA AGGATTCTGG CACCCAAGGT CCCATGTATA CCTCGCTGAA ACGTCGATTA GATGAATCGA AAGTGGCGAG TAACTTTGCC GATCTCGATC AACAACTGGC CGAAGCGGAA AATCTTTATC AAGCCGCTGA TCCCAGTCTG TTTAACGATA TGTTGTCAGA CCCTGTCAAC GTGGTTGCCG ATATGTCTGA CGGCAAGCTG GCCCGCGTGA ATGCGATTAG CCGTGAGGCC GCAACATTAG CCAATGGCGG CGAAGATTTT GGTCCAGGCA GTCAGCTAGT TGGTAATCCG TCTTACGGTA ACTGGCAAAC CGACTCGAGC GGCACGTCGT TTTGGGCTTG GTATGGCATG TATTCGATGT TTTCGAATGT CTTCAATCGC CCTGTTTCCT ACGATCGTTG GTCGGGTAAC CGAGGTTATA GCTATTACAA TGACGTAGGT CGTTATCGCT ATACCTCACC CAAACAAGCG GATGCGCAAA ATAAGACCTT CGAACAAACG AAAAAACGTT TCGATTCCCA AGGTAAGCGC TTCGACAGCC CTTATGCCAA ACCGCGTACC GGTGGCACGG CGTTATCCCG TGAAAGTACC AGCACGCCAA AGGCCAGCAA CACCACGAGC GCAAGCAAGA GTTCGAGTAG TAAGTTCCGC TCTAACTATG CTAAAGACAG CAGTTTCCGT AATTCCAGTA ATCGCACGAC CCGCAGTGTG CGCCGGGGCA AGTAA
|
Protein sequence | MAGMLTRVLT SILFLAVMLS LTGCGDERPD KIAKYQQLTQ QRLATLTTMI DDGQLRNANL LKQYTTLLKQ QKPDLAPLLD ELAKDSGTQG PMYTSLKRRL DESKVASNFA DLDQQLAEAE NLYQAADPSL FNDMLSDPVN VVADMSDGKL ARVNAISREA ATLANGGEDF GPGSQLVGNP SYGNWQTDSS GTSFWAWYGM YSMFSNVFNR PVSYDRWSGN RGYSYYNDVG RYRYTSPKQA DAQNKTFEQT KKRFDSQGKR FDSPYAKPRT GGTALSREST STPKASNTTS ASKSSSSKFR SNYAKDSSFR NSSNRTTRSV RRGK
|
| |