Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0880 |
Symbol | |
ID | 5370278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1040637 |
End bp | 1043831 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829075 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_001365097 |
Protein GI | 152999416 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000190412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCGA TAACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC AATCTCGACG AACTGTTCAA AGCGATCAGC GACAACTACA TTGTCGATGA AGAACAATAC TTGTCAGAGT TGATCCAACT AGTTCCCTCC AGTGATGAAG CCATAGCGCG CGTCACTCGT CGTGCCCACG AACTGGTTAA CAAGGTTCGT CAATTCGATA AAAAAGGTTT GATGGTTGGC ATAGATGCCT TCCTGCAACA GTACAGCTTA GAAACACAGG AAGGCATTAT CCTGATGTGT TTAGCCGAAG CGCTACTGCG TATTCCCGAT GCGGCCACTG CCGATGCACT GATTGAAGAT AAGCTTTCAG GCGCTAAGTG GGATGAGCAC ATGAGTAAGA GTGACTCTGT ACTCGTTAAC GCATCGACCT GGGGCCTTAT GCTCACGGGT AAAATTGTTA AGCTCGATAA AAAAATTGAT GGCACCCCAA GCAACTTACT GAGCCGCTTA GTTAATCGTC TCGGCGAGCC AGTGATCCGC CAAGCCATGA TGGCCGCGAT GAAGATCATG GGTAAGCAGT TCGTGCTGGG CCGCAACATG AAAGAAGCCC TGAAAAACAG CGAAGACAAG CGTAAGTTAG GCTATACCCA TTCATACGAT ATGCTGGGCG AAGCGGCGTT AACTCGCAAA GATGCAGAGA AATACTATAC CGATTACGCC AATGCGATCA CTGAGCTCGG TGCTCAAAGC TATAACGAAA ATGAATCACC GCGCCCAACG ATTTCAATCA AGCTATCGGC ATTGCACCCA CGTTACGAAG TGGCCAATGA AGACCGCGTT TTAACTGAAC TGTACGACAC AGTTATCCGC CTTATTACAC TGGCTCGCGG CTTAAATATC GGTATTTCTA TCGATGCTGA AGAAGTCGAT CGCCTCGAGT TGTCACTGAA ACTGTTCCAA AAACTGTTTA ATTCAGAAGC GGCAAAAGGC TGGGGATTAC TCGGTATTGT GGTTCAAGCT TACTCTAAGC GTGCCCTGCC CGTACTGGTT TGGTTAACTC GTCTTGCCAA AGAGCAAGGA GATGAAATCC CCTTACGTCT GGTAAAAGGC GCCTATTGGG ATAGCGAACT GAAATGGGCC CAACAAGCTG GCGAAGCCGC TTACCCACTT TACACTCGCA AAGCCGGTAC TGACGTTTCT TACCTCGCCT GCGCCCGCTA CTTGTTATCG GATGCGACTC GCGGCGCTAT CTACCCACAA TTTGCTAGCC ACAATGCGCA AACCGTTGCG GCGATTTCAG ATATGGCGGG CGATCATCAC CATGAGTTCC AACGCTTACA CGGCATGGGA CAAGAGCTGT ACGACACGAT TTTGTCGGAA GCTGGCGCCA AATCGGTACG TATTTATGCC CCCATCGGTG CCCATAAGGA TCTACTGCCC TACTTAGTGC GTCGTCTGCT GGAAAACGGG GCCAACACTT CGTTCGTCCA CAAGCTCGTC GATCCTAAAA CCCCAATCGA CTCATTAGTG GTGCATCCGC TAAAAACGCT GACGGGCTAT AAAACCCTGG CTAACAATAG AATCGTTTTA CCTGCCGATA TTTTCGGTAG TGATCGCAAA AATTCCAAGG GACTCAATAT GAACATCATT TCCGAATCTG AGCCATTTTT CGCGGCAATA GAACAGTTTA AAAATACCCA ATGGCAAGCA GGCCCTCTGG TTAACGGCAA AACCTTAACC CGTGAGCACA AAACCATAGT CAGCCCATAC GACACCACCC AAACAGTGGG TCAAGTAGCC TTTGCCGATG ATGCGGCCAT AGAACAAGCA CTCGCGTCTG CTGAAGCGGC GTTTGCCTCA TGGGCACGTA CGCCGGTTGA AACCCGTGCC TCTGCGCTGC AAAAACTCGC TGACTTATTA GAAGAAAACC GCGAAGAATT GATCGCCCTG TGTACCCGTG AAGCGGGCAA GAGCATTCAA GACGGTATCG ACGAAGTACG TGAAGCCGTT GATTTCTGTC GTTACTACGC AGTACAAGCC AAGAAAATGA TGGCGAAGCC TGAACTGCTT CCTGGCCCAA CGGGAGAGCT GAACGAACTG TTCCTCCAAG GCCGTGGCGT ATTCGTGTGT ATCAGCCCAT GGAACTTCCC ATTGGCTATC TTCCTCGGCC AAGTGTCTGC AGCATTAGCG GCAGGTAACA CAGTGATCGC GAAACCTGCG GAGCAAACCT CGATTATTGG TTACCGTGCA GTACAACTTG CTCACCAAGC AGGTATTCCT GTTGAGGTTC TGCAATTCCT ACCAGGTACG GGTGCGACTG TCGGTAGCGC AATTACAGCC GATGAACGTA TCGGCGGCGT ATGCTTTACC GGTTCAACTG GCACTGCAAA ACTGATTAAC CGTACACTGG CCAACCGTGA TGGCGCGATT ATTCCTTTAA TCGCCGAAAC TGGTGGTCAA AATGCCATGG TAGTGGACTC AACCTCACAA CCTGAGCAAG TGGTTAACGA TGTCGTTTCA TCGTCATTCA CTAGCGCAGG TCAACGCTGT TCAGCGCTGC GCGTGCTCTT CCTTCAAGAA GACATCGCCG ATCGCGTGAT CGAAGTGCTG CAAGGCGCGA TGGATGAATT AGTGATTGGC AACCCAAGCT CAGTGAAAAC TGACGTAGGC CCAGTGATTG ACGCCACCGC CAAAGCCAAC TTAGATGCGC ACATCGACCA TATCAAGCAA GTCGGTAAGC TTATCAAGCA AATGCCGTTG CCTGCTGGCA CTGAGAACGG TCACTTCGTT TCGCCCACTG CGGTTGAAAT CGATTCGATT AAAGTGCTTG AGAAAGAACA CTTTGGCCCA ATCCTGCACA TTATTCGCTA CAAAGCAGCC GAGCTAAGCC AAGTGATCAA CGAGATCAAC AGTACAGGCT TTGGCTTAAC CTTAGGTATC CACAGCCGTA ACGAAGGCCA TGCCCTTGAA GTTGCAGATA AAGTGAACGT GGGTAACGTG TATATCAACC GTAACCAAAT CGGCGCTGTA GTGGGTGTAC AGCCTTTCGG TGGTCAAGGC CTGTCAGGCA CAGGTCCTAA AGCCGGTGGC CCACACTACT TAACCCGTTT TGTGACTGAA AAGACTCGCA CTAATAACAT CACCGCTATC GGTGGTAATG CGACGTTGTT ATCACTGGGT GATAGCGAAG AATAA
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Protein sequence | MEAITMFKAS EVLAGRYDSA NLDELFKAIS DNYIVDEEQY LSELIQLVPS SDEAIARVTR RAHELVNKVR QFDKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED KLSGAKWDEH MSKSDSVLVN ASTWGLMLTG KIVKLDKKID GTPSNLLSRL VNRLGEPVIR QAMMAAMKIM GKQFVLGRNM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DAEKYYTDYA NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LITLARGLNI GISIDAEEVD RLELSLKLFQ KLFNSEAAKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG DEIPLRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ FASHNAQTVA AISDMAGDHH HEFQRLHGMG QELYDTILSE AGAKSVRIYA PIGAHKDLLP YLVRRLLENG ANTSFVHKLV DPKTPIDSLV VHPLKTLTGY KTLANNRIVL PADIFGSDRK NSKGLNMNII SESEPFFAAI EQFKNTQWQA GPLVNGKTLT REHKTIVSPY DTTQTVGQVA FADDAAIEQA LASAEAAFAS WARTPVETRA SALQKLADLL EENREELIAL CTREAGKSIQ DGIDEVREAV DFCRYYAVQA KKMMAKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI FLGQVSAALA AGNTVIAKPA EQTSIIGYRA VQLAHQAGIP VEVLQFLPGT GATVGSAITA DERIGGVCFT GSTGTAKLIN RTLANRDGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS SSFTSAGQRC SALRVLFLQE DIADRVIEVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN LDAHIDHIKQ VGKLIKQMPL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHIIRYKAA ELSQVINEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DSEE
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