| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0877 |
|---|
| Symbol | |
|---|
| ID | 5370251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1038022 |
|---|
| End bp | 1038765 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640829072 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001365094 |
|---|
| Protein GI | 152999413 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3821] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCT CGCTATTAGA TATTTCTGCA TTGGTGTGGT TTATCGTTTC TTGGGCTGGC
TATACCGCCT TTGCCCGTCG TAAGGCGAAA GATACCGACT GTATTGCCCG TGGTCTGCAT
AAGCATAGAA TTTACTGGAT GCTTGAGGTG ATGACCCGCG GCGTGCGTGT GGGTGATGCG
GCGCTGCTGG CCAACCTTGA GCGCAATATT GCCTTTTTTG CCTCGACAAC CCTGTTTGTG
CTCGCGGGTG TGCTGACCTT ATTTGCCCAA GTTGAGCGGC TAGAAAGTGT TATTGCGACT
ATTCCCTTCG CCACACCACC GAATCATGCG CTGGTGCAAG TCAAGCTCGC CTTGCTAGTC
AGTATTTTTG TGATGGCCTT CTTCCAGTTT ACTTGGTCGA TGCGCCAATA CGGTTTTGTG
AACGTGATGA TAGGCGCGGG TCCTTTAGAC AGCGATGGCT CAAACGACAA TCTCAAAGCC
TACGCAAGGC AAATGGCGAC AGTGCAAGAT CAAGCGGCGC ACTCCTATAA CTATGGCTTA
CGCGCCTATT ACTTTTCGAT GGCAGTATTG TGCTGGTTTG TGCATCCGAT ACTCTTTATC
TCGGCGAGCT TATTTGTGGT CGCGACCTTA TATCGCCGCG AGTTTAAGTC CCGCGCGGTT
CTGGCGATCA CAGCGGCAAA AGGCCATCTG CAAATAGAGA GTCAAGTGCG GGAAACGGCA
CGCAACCACA AAATAGAGTC ATAA
|
|---|
| Protein sequence | MTFSLLDISA LVWFIVSWAG YTAFARRKAK DTDCIARGLH KHRIYWMLEV MTRGVRVGDA
ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLESVIAT IPFATPPNHA LVQVKLALLV
SIFVMAFFQF TWSMRQYGFV NVMIGAGPLD SDGSNDNLKA YARQMATVQD QAAHSYNYGL
RAYYFSMAVL CWFVHPILFI SASLFVVATL YRREFKSRAV LAITAAKGHL QIESQVRETA
RNHKIES
|
|---|
| |