| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0857 |
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| Symbol | |
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| ID | 5373122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1014404 |
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| End bp | 1015999 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640829052 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001365074 |
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| Protein GI | 152999393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAGTCA TAGATCCCAT AGTGAATGGT TTAAACTCAG GTTGGTTACA TACCGACGCG
AGCCAATTGC AAGAAAACCA ACAGTTTGAA GCCGATGTTA TTATTGTCGG CACAGGTGCT
GGCGGCGGTG TGGCGGCCGA AATCCTCACC CAAGCAGGGC TAAGCGTGAT CATGATTGAG
GCGGGGCCGC TAAAATCCTC CAGCGATTTT AATATGGAAG AGCGGGTCGC TTATCCCAAC
TTGTATCAAC AAGCCGCGGC GATGAAAACC GCCGACAAGG CGATTGGGAT TTTTCAAGGC
CGCGCAGTCG GTGGCTCAAC CACAGTTAAC TGGACCACTT CTATTCGCAC GCCGACCGAG
GCGTTAGCTT TTTGGGCGCA ACATAAGTCG GTTGCTGGGC TTAATCGCGA GAGCTTAGAC
CCTTGGTTTG AGCAAATGGA GCAGCGGCTC AATATCCATG AATGGAACTA TGAGCCTAAT
CGCAATAATG CCGCCCTGAA GCAAGGTTGT ATCAATCTTG GCTGGGAATA CACAGTCATT
AAACGCAATG TGGCGGGTTG CTGGAATACC GGCTATTGCG GCATGGGTTG TCCGGTCAAT
GCGAAGCAAT CTATGTTAGT GACCACGATT CCCTCGGCAC TTGAGAAAGG CGCGCAGCTG
ATCAGTCGCG CTAAAGTGAC TAAGATTGAG CACCATAATG GCCAAGTGTT TGCGTTAAAG
GCGCAGGCGT TGGATGCGAA TTTACGACCC ACTGACGTTG AGCTGTTATT TAAGGCTAAA
CATTATATTT TGAGTGCGGG CGCTATCCAT ACGCCGACGA TTTTGATGCG CTCGCAGGTG
CCCGATCCCC ACAAACTTTT GGGTAAACGC ACTTTTTTAC ATCCGACTTT GTTATCCGGC
GGCGTGTTTG CCGATTCGAT CAATGGCCAT AGCGGCGCGC CGCAATCTAT CTATTCCGAT
GAATTTGTGT GGAAGAATGA CGCCGATGGT GAGCTCGGTT ATAAACTCGA AGTGCCACCG
GTGCATCCGA TTTTAATCGC CTCTAAAACC TTAGGTTATG GCGCGAGTCA TGCCGAGTTA
ATGGCGCAGT TCAATCAGTT GCAAGTGACG ATTGCCTTAA TCCGCGATGG TTATCATCCC
GACAGTCAGG GTGGTGAAGT GCACTTAACG CCTAAGGGAT TTACCCTAGA TTATCCGCTG
ACCGATGCCT TTTGGCGGGC CGCAAGACGC GCTTTTGCCA GTATGGCTGA GTTACAATTC
TCGGCGGGAG CATTAAAAGT GTTGCCGATC AGCGATGGTA TGCCTTACTT ATCTTCGTGG
AAAGACGCCA AAGAGAGCAT TGCGCAGATG TCACTCGCGC CACTGCGTAC TATCGTCGCA
TCGGCCCATG TGATGGGCGG TTGTCCCTTC GGCGAAGATG AAAAGCTTTC TATGGTCAAC
AGTTATGGCC AGTTGCACTA TTTAGAAAAT CTGTCTGTAA TGGACGGTTC TATCTTCCCC
ACCAGCCTTG GCGCTAACCC GCAGCTGTCG ATTTATGGCA TCACAGCACG TAATGCCACT
GCACTCGCGC AAAAGCTCAC CGACGGTAAA GGGTGA
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| Protein sequence | MAVIDPIVNG LNSGWLHTDA SQLQENQQFE ADVIIVGTGA GGGVAAEILT QAGLSVIMIE
AGPLKSSSDF NMEERVAYPN LYQQAAAMKT ADKAIGIFQG RAVGGSTTVN WTTSIRTPTE
ALAFWAQHKS VAGLNRESLD PWFEQMEQRL NIHEWNYEPN RNNAALKQGC INLGWEYTVI
KRNVAGCWNT GYCGMGCPVN AKQSMLVTTI PSALEKGAQL ISRAKVTKIE HHNGQVFALK
AQALDANLRP TDVELLFKAK HYILSAGAIH TPTILMRSQV PDPHKLLGKR TFLHPTLLSG
GVFADSINGH SGAPQSIYSD EFVWKNDADG ELGYKLEVPP VHPILIASKT LGYGASHAEL
MAQFNQLQVT IALIRDGYHP DSQGGEVHLT PKGFTLDYPL TDAFWRAARR AFASMAELQF
SAGALKVLPI SDGMPYLSSW KDAKESIAQM SLAPLRTIVA SAHVMGGCPF GEDEKLSMVN
SYGQLHYLEN LSVMDGSIFP TSLGANPQLS IYGITARNAT ALAQKLTDGK G
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