Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0853 |
Symbol | |
ID | 5373392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1011389 |
End bp | 1012276 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829048 |
Product | phosphoribulokinase |
Protein accession | YP_001365070 |
Protein GI | 152999389 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAA AACATCCCAT TATTGCAGTT ACAGGCTCAT CAGGCGCGGG AACCACTACG ACGACCACCG CCTTTAGCCA TATTTTTCGC CAACTAGGGA TTAACGCCGC CTTTGTCGAA GGCGACAGCT TTCATCATTT TACCCGCGCT GAAATGGAAG TGATGATCCG TAAATCCCAA GCTGAAAACC GCAACCTCAG CTATTTTGGC CCAGAGGCCA ATAACTTTTC CCGCTTGGAA CAATGCTTTC GCGATTACAG CGCCACAGGC CAAGGCGAAA CCCGCAGCTA TTTACACACC TTCGATGAGG CAGTGCCTTT TAACCAGATG CCCGGCACTT TTACCCAATG GCGACCCTTG CCAGAAAATA CCGACATGCT GTACTACGAA GGCCTGCATG GCGGCGTGGT TACCGGTGAT GCCAATGTCG CCCAGCATGT CGATCTATTG ATCGGCATGG TGCCCATAGT CAACTTAGAG TGGATCCAAA AAATTATCCG TGACACTTCG GAGCGCGGCC ACAGCCGTGA AAAAGTCATG GGCTCAATTG TGCGCAGTAT GGATGACTAT ATTAAGCACA TGACGCCGCA GTTCTCCCGC ACTCACATTA ACTTTCAGCG GGTGCCAACG GTCGATACCT CTAACCCCTT TAGCGCCAAA GATATTCCGA GCCTAGACGA GAGCTTTGTG GTGATCCGCT TTCGCGGCAT CAATAATGTC GATTTTCCCT ATTACCTTAA TATGATCCAA GGATCATTTA TGTCACGGGT TAACACCTTA GTGGTGCCCG GCGGTAAAAT GTCGCTAGCC ATGGAGCTTA TCCTCACGCC TTTGATTAAA GATTTGATGG AAAAACGCCA GCAACTCAAT ACTCCAGAAG CGAACTAA
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Protein sequence | MSAKHPIIAV TGSSGAGTTT TTTAFSHIFR QLGINAAFVE GDSFHHFTRA EMEVMIRKSQ AENRNLSYFG PEANNFSRLE QCFRDYSATG QGETRSYLHT FDEAVPFNQM PGTFTQWRPL PENTDMLYYE GLHGGVVTGD ANVAQHVDLL IGMVPIVNLE WIQKIIRDTS ERGHSREKVM GSIVRSMDDY IKHMTPQFSR THINFQRVPT VDTSNPFSAK DIPSLDESFV VIRFRGINNV DFPYYLNMIQ GSFMSRVNTL VVPGGKMSLA MELILTPLIK DLMEKRQQLN TPEAN
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