Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0844 |
Symbol | panC |
ID | 5369726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1002477 |
End bp | 1003322 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829039 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_001365061 |
Protein GI | 152999380 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.126376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACTA GCGCCCATAT TGATGATATT CGCACCCAAG TGCGTGCATG GCGTGCCAAG GGCGAAACCG TCGCCTTTGT GCCTACCATG GGTAATCTCC ATCAGGGACA CATTACTTTA GTCAAAGAAG CCGCGAGCAA GTGTGACCAT GTGGTGGCCT CTATTTTCGT TAATCCAATG CAATTTGGTC AGAACGAAGA TCTGGATGCT TACCCACGCA CACTCGCTGC CGACAGCGAA GCCCTCACGG CCGCTGGCGC TGAGCTATTA TTCACCCCAA CGCCAACCGT GATGTATCCC AAGGGTCTAG AGCAACAAAC CTATGTCGAA GTCCCAGGGA TTTCCAACGT GCTTTGTGGT GCGAGTCGTC CGGGGCATTT CCGTGGCGTT GCGACTATCG TTTGTAAACT GTTTAACATA GTACAGCCCG ATGTGGCGCT ATTCGGTAAT AAAGACTATC AACAGCTATT AGTGATCAAA ACTATGGTTG AAGACTTGTC ATTGCCGATT GAAATTATCG GTGTCGATAC CATACGTGAG GACTCAGGTT TAGCCATGAG TTCACGCAAT GGTTACCTCA CTGCCGCAGA AAAAGCCGCA GCGCCTGCGC TAAAACAAGC CATAGACGCC ATGGCCGCAG GGATTAAGCA AGGCGAAAGC TTTGAGCAAA TGACTGAGCA AGCAAAAGCC TGTTTAGTCG CGGCTGGTTT TACGCCGGAT TACCTCGAAA TTCGCCACGC TCACACGCTT GAACAAGCCC AGAACCAAGA CCACGCTTTA GTGATTTTAG CTGCGGCCTA TATAGGCAAA GCGCGACTTA TCGATAACTT AAGATTCGAT CGCTAA
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Protein sequence | MITSAHIDDI RTQVRAWRAK GETVAFVPTM GNLHQGHITL VKEAASKCDH VVASIFVNPM QFGQNEDLDA YPRTLAADSE ALTAAGAELL FTPTPTVMYP KGLEQQTYVE VPGISNVLCG ASRPGHFRGV ATIVCKLFNI VQPDVALFGN KDYQQLLVIK TMVEDLSLPI EIIGVDTIRE DSGLAMSSRN GYLTAAEKAA APALKQAIDA MAAGIKQGES FEQMTEQAKA CLVAAGFTPD YLEIRHAHTL EQAQNQDHAL VILAAAYIGK ARLIDNLRFD R
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