Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0835 |
Symbol | |
ID | 5370375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 988128 |
End bp | 993476 |
Gene Length | 5349 bp |
Protein Length | 1782 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829030 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001365052 |
Protein GI | 152999371 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAA GTAAACTTCG TACTTTTCGC AGCAGAATCT TATCCCACAT AGCCTTGCCT CTCATTCTAA TCATGGCGAG CGTTTATGCT GTCAATGCTT GGTTTAGTTA TCTCTCCTCG GAGAAGCGGC TCTACCATAG CCTTACGCAA GAGGCGAGTC ACTCGGCTTC GCGTCTGCAA TTGTTACTCG AGCACGCACA AGCCAATACC CAAGGCCTTG CTGATTTTAT TGGGTTTTTG TCAAGCAAAG AAGATATGAA TGACGCTGAG AGCGTTAAAA GTGTCTTGAT GAATCGACTC AAACGTAATC CTGATTTCTT TGGCTCCGCA GTCGCGTTTA AACCCAACAC CTTCCCCAAT CGAAAACTCT TTTCTCCCTA TGTTTACCGC GACACCAGTG GTAGCGACGA TCTCCATTAT CTCGATATTG GCGCCGAGGG TTACGATTAT ACCGATGGCA CTTGGGATTG GTGGAACAAT GCCATCAATC AAGCGGCGGG CTACTGGTCA AAGGCGTACT TTGATGAGGG GGCGGGCAAT ATTCTGATGG TGACTTATTC GGCTCCTTTT GGTGAGGCGG AGCATTATTT TGGTGTCGCG ACGGTTGACT TAGCGCTAGA TGGCTTGCCA AAGCAATTAG GAATTGCGCC TAATCGACTG GTGGTTTTAG ACGATCAAGG GCGACTTATT TATCATGTCG ATAGGGAAAA AGTGTTGGCC ACCACTTCAA CACAGTGGCT CGATAAAAAT AAATATAGGA ATGCTGACTT TTGGGCCTTA CAAGCGAAAG GACTTGATGG TCAGGCAAGG TTTGTTGACG ATAAGGATGT GGTTTACCTC GCGAGTATTG CGACCGTTCC GCAGCTAAAA TGGCGCGTCA TAGTGCTAGC GCCAGAGCAA GAATTATTCA GTTCCCTGCT CGATGATATG GCATCCATAA TACTCAATTT GAGTTTGCTA ACCCTCTTAT TATTGTTGAC TTGCTATCTG GCCGCTAAGC GACTGACTCG GCCCTTAGAG CTACTCGAGT CGGGTATCTT GTCCTTTGGG CAGGGTAAAA CCCAGCAGCT CATTATCCCC CAAGGTGCCG TGAGTGAGAT TGTGACGCTG AGCAATACCT TCAATCAAAT GGCGGAATTA CTCGCCGAAC GTGAGCAAGC CATTCTTGAT TCCCGTGGTA ACCGCTTTGC TCGCCTGATT GATGGTATGA GCGATAAGTC TTTCTATTGT TCCCTCGATC CTGACGGCCA GCTGGCGCAA GTGAGCGAGG GCGTGACTAA GGTGCTGGGG ATCTCCCCTG ATCTGCTCAA GCGCAAATAC CAAAGACTGT TTTCGGCCAA TCCCCTCAAT GAGAAAAACT GGCAATACAC TGATTTGGCT TTAAAAGGCC AAAATGTTCC TTCGCATCAA GTGGAAATGC TGGATGATCA AGGGCATTTA AGAAGGCTCG ATGTGTTTAT GCAGCCATTA ATGTCTGACA CAGGTGAGCT AATGTCGGTG GAGATGTTAT TTACCGATGT CACAGAGCAG TTCTCGGCGG CTGTCTGGTC AAATGCGGTA CTGGAAGCCG CGCCCGAGGC CATGTTAATT GTCGATGAGC TAGGGCAAAT CGTGTTCACT AACAGTCGCT GTCTGCAGCT CTTTGGATAC GAAACGGGCG CTATGCTGGG GTTGCAGGTT GAGGCGTTAT TGCCGCAAGA ATTGGGAGAA AGGCATGTAC TTGAACGGCA AACATTCCTG CGTGAAGGCC GTGATAGAAG TATGGCAAAT GCCCGTCATG TGCGGGCGTT AAAAGCCGAT GGTAATGAAT TTATTGCGGA AATAGCGCTG AGTATTCTTC CCACCGCCTT TGATGGACAA AGGCAAGTGG CGGCTTCAAT ACGCGATATG ACACAAAAAC TGGCCGTTGA GCAGAAGATC CGTGATAGCG AACAGCGTTT TCGTGGACTA GTGACGAATA TTCCCGGCGC CGTTTATCGG ACTCGCATCG GGGATGTATG GTTCATGGAA TATATCAGTG ACAATATTGC CGAAATTACG GGTTATGCAG CGAGTCAGTT TATTGAAAAT CGCCAACGTA CCTTTGCTTC GTTGATTTTA GAGGAGGACA GGCCTACATG TCATTTGCAT ATTGATAGAG CACTCGCGCA GCAAGAAACC TTTGAAGTGG AATATCGTAT TCGCCACCGC GATGGCAGTA TTCGCTGGGT ACATGAGAAA GGTAAGGCGA GTTATACCGA AGAGGGCATT CCACTCTGGT TTGACGGCAG TATCGACGAT ATTACCGAGA GTAAACTCGC GCTGGTACAG TTAGAGCAAT CGCGTCAACA GATGACCAAT ATTACTGAGT CGATTCCTTG CACTGTGTAT CAATTGCAGT GGCAATCGCC TACGGACCGA AGATTTACCT TCCTCTCTGG TGCGGCAATG AAGATGCTAG GGCTGCATCG CGATGATCTG ATGAGTAATT TTGACATCAT AGCCGAGCGG ATTTTTGACG AAGAAAGGCC CGATGTTGTG CGGGCATTGT CGGGTAAGAG TGAAGACAGA CTGCAATGGA TACGCGAGTT TCGCTATCGC CACCCCAATG GCAGCATACG TTGGATGGAA GCGGGTGCGA GCGGTCATTT GGGTGAAGAG GGTGCCATCA CGTGGAATGG TTATGTGATG GACATTACCC AACGTAAAAC CATAGAGCAA GAGTTAGCCC TCAGTGAGGC GCACTTTAAG GCGCTGTTCG ATGGGGCGAC CATTGGCATA GTCAATGTTG ATATTAAAGG CGTTATTTTA GATTGTAATG ACCAATTCTG TGCCGATATG GCGCTGTCAC GTAACCATTT ACGTAATACT GCTATTTTTG AGGTTCTCAG TGAGCAAGAT CAACCCATAG CCAAGGCGCA ATTTCAGGAG TTGGTTGAAG GTAAAATTGA TCATTATCGC GGCGAGCGCA GTTTTATTCG TCCTTCCGGT GCGCCTTTGT GGATGACAGT CAATGTGTCG GCACTGCTTG ATGCCCAAGG ACAATTTGAA TCGGCCGTGA TCAGCATGGT CGATATGACA GAGCTTAAAT TGCTCTCAGA TGAACTGTTA CTCGCCAAAG AGCAAGCCGA TGCGGCCAGT AAAGCCAAAG GTGACTTCTT GGCGAATATG TCCCACGAAA TCCGTACCCC AATGAATGCC ATTATTGGCA TGTCCCAGCT GTGCTTGCAG ACCGAATTAG ATAAAAAACA GAAGAATTAT GTAGAGAAGA TTGAGCGGGC ATCGCAGTCT TTGCTGTCGA TTATCAATGA CATTCTGGAT TTCTCTAAGA TTGAAGCGGG TAAGTTAGAT ATAGATTCAA TCCCTTTTCA GCTCGATACT ATGTTGGAAG ATCTCAGTGA TATGTTCTCT GAGAAAGCTG CCCACAAACA GATTGAATTA TTGTTCGCCG TTGCGCCCAA CGTGCCTCGT TATCTGTTAG GGGATTCGCT GCGATTAGGC CAAGTGTTGA TTAACCTGAT GAATAACGCC ATTAAGTTCA CCGAACGCGG TGAGGTTTTG CTGTCGCTAA GCTTAGTTGA GCAGCAAGAT GATGATGTCG TGCTGCGTTT TAGCGTGCGT GACAGCGGCA TCGGGTTAAC TGAGCAGCAG CAAGCAAAAT TGTTTAAATC TTTTACCCAA GCGGATACTT CAACCACCCG TAAATACGGT GGCACAGGTT TAGGTTTGGC TATTTGTAAG CAGCTAGTCG AACTCATGGG CGGGAAGATA GGGGTAGAAA GTCAGTTCGG TCATGGCAGC ACTTTCTATT TCACGGTCAA GTTGCACATT TCCGATGGTC AGAAATTAGT ACTCGAGCAA GAGCTTGAGG GCATGTCTGT GCTGGTGGTC GATGATAACG CGACCGCTAG AGATATTATG CGCACTACGC TCGAAAGTAT GGGCTTTAGG GTCGATACGG TTCGCTCGGG TGAAGAAGCA ATAAGCCGCT GCCTACTGCA AGCCTATGAA GTGGCGTTAA TCGATTGGAA AATGCCTAAC ATGGATGGGC TTGAAACCGC GCGTCAAATC CAATTGCAGG CTCAGTCGCA ATCTCAATCA CAACCTCAGT CTCAGCCCAA AATTTTAATG GTATCTGCCC ATGCGGATCG TGAGTTCCTC ACTCAAATTG AGCAACTGGC TTTAGCGGGA TACATCAGTA AACCCATCAG TGCCTCACGC TTACTCGACG GCATAATGAA TGCGATTGGC CGCGAAGGCA TATTGCCCGT GAGGCGCCGC ACCGAAGAGT TGGCACCACA GTTGTTATTG CCACTGCAAG GGAAGCGTAT CCTTTTAGTG GAAGATAACG AGATGAATCT CGAAGTCGCC AGTGAGTTTT TAGAGCAAGT GGGGATTATT TTATCCATAG CGACCAATGG TCAAATCGCC TTAGATAAAC TGTCGCAGCA GCATTTTGAT CTAGTGTTAA TGGACTGCCA AATGCCGGTC ATGGATGGTT ATCAAGCCAC TCAGGCGATA AGAAAAAGAC CCGAGTTGGC AAATTTACCC GTCGTCGCCA TGACTGCCAA TGCGATGGCG GGCGATAGGG ACATGTGCAT CAGGGCGGGC ATGAACGACC ATATCGCCAA ACCGATAGAA GTGAATGTTC TCTATCAAAC CCTGTTGAAA TACCTCGCAC CCGCATCTGA AACGGCTGCA GTAGATACCT TTACTCAATC GATATTGAGT AACACTAAGG GTGAGGCAGG CAATAGTGCA GAACAAACCG TATTGCTTAA GTGGCCAGAG CACCCAGAGC TGGATATCGA TAGAGGTTTG CAACTGGTGC AACACTCGAC GCGGCTTTAT CAACGCATAT TTGATCGTTT TGTGAGCAGT CAGCGTAATG TGGTGGAACA GGTTCGCAAA GCCATCGCGG CGAATCAAAT CGAAGATGCG GTGCGTATTG CCCATACCCT TAAAGGCTTA GCGGGCAATT TAAGCTCGGC TAAATTGGTG GAGTTAGCGC GTTTACTTGA GTTGCATTTA ACTGAGAATG CGCCCTTTGA AGATGAGTTA GTTCAGATTC AACCGCTAGT GGCTTCTATT TGCGATGCGA TTGAATACGC CAAACCCGCA GCGGTGAATC AAGCCGAACC CCAAGCTGTT GATTTATTAT CTGCTGAAGA TTTAAGGGCG GCATTACAGG CCTTGCGGCA GAACTTAGAT GATGCCGATG CCAGCGCAGT GGCAAAAATT GATGCCTTAA AGCCGCAGGT GAGCAGTGCA ATGTGGCAAG CGTTAAGCCC TGCCTTGTCT ATGATTAATC AGTACCAGTT TGATGAGGCG ATCGACTTGA TTGATGATGT CATTGCTCAG TTAGGTTAA
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Protein sequence | MDKSKLRTFR SRILSHIALP LILIMASVYA VNAWFSYLSS EKRLYHSLTQ EASHSASRLQ LLLEHAQANT QGLADFIGFL SSKEDMNDAE SVKSVLMNRL KRNPDFFGSA VAFKPNTFPN RKLFSPYVYR DTSGSDDLHY LDIGAEGYDY TDGTWDWWNN AINQAAGYWS KAYFDEGAGN ILMVTYSAPF GEAEHYFGVA TVDLALDGLP KQLGIAPNRL VVLDDQGRLI YHVDREKVLA TTSTQWLDKN KYRNADFWAL QAKGLDGQAR FVDDKDVVYL ASIATVPQLK WRVIVLAPEQ ELFSSLLDDM ASIILNLSLL TLLLLLTCYL AAKRLTRPLE LLESGILSFG QGKTQQLIIP QGAVSEIVTL SNTFNQMAEL LAEREQAILD SRGNRFARLI DGMSDKSFYC SLDPDGQLAQ VSEGVTKVLG ISPDLLKRKY QRLFSANPLN EKNWQYTDLA LKGQNVPSHQ VEMLDDQGHL RRLDVFMQPL MSDTGELMSV EMLFTDVTEQ FSAAVWSNAV LEAAPEAMLI VDELGQIVFT NSRCLQLFGY ETGAMLGLQV EALLPQELGE RHVLERQTFL REGRDRSMAN ARHVRALKAD GNEFIAEIAL SILPTAFDGQ RQVAASIRDM TQKLAVEQKI RDSEQRFRGL VTNIPGAVYR TRIGDVWFME YISDNIAEIT GYAASQFIEN RQRTFASLIL EEDRPTCHLH IDRALAQQET FEVEYRIRHR DGSIRWVHEK GKASYTEEGI PLWFDGSIDD ITESKLALVQ LEQSRQQMTN ITESIPCTVY QLQWQSPTDR RFTFLSGAAM KMLGLHRDDL MSNFDIIAER IFDEERPDVV RALSGKSEDR LQWIREFRYR HPNGSIRWME AGASGHLGEE GAITWNGYVM DITQRKTIEQ ELALSEAHFK ALFDGATIGI VNVDIKGVIL DCNDQFCADM ALSRNHLRNT AIFEVLSEQD QPIAKAQFQE LVEGKIDHYR GERSFIRPSG APLWMTVNVS ALLDAQGQFE SAVISMVDMT ELKLLSDELL LAKEQADAAS KAKGDFLANM SHEIRTPMNA IIGMSQLCLQ TELDKKQKNY VEKIERASQS LLSIINDILD FSKIEAGKLD IDSIPFQLDT MLEDLSDMFS EKAAHKQIEL LFAVAPNVPR YLLGDSLRLG QVLINLMNNA IKFTERGEVL LSLSLVEQQD DDVVLRFSVR DSGIGLTEQQ QAKLFKSFTQ ADTSTTRKYG GTGLGLAICK QLVELMGGKI GVESQFGHGS TFYFTVKLHI SDGQKLVLEQ ELEGMSVLVV DDNATARDIM RTTLESMGFR VDTVRSGEEA ISRCLLQAYE VALIDWKMPN MDGLETARQI QLQAQSQSQS QPQSQPKILM VSAHADREFL TQIEQLALAG YISKPISASR LLDGIMNAIG REGILPVRRR TEELAPQLLL PLQGKRILLV EDNEMNLEVA SEFLEQVGII LSIATNGQIA LDKLSQQHFD LVLMDCQMPV MDGYQATQAI RKRPELANLP VVAMTANAMA GDRDMCIRAG MNDHIAKPIE VNVLYQTLLK YLAPASETAA VDTFTQSILS NTKGEAGNSA EQTVLLKWPE HPELDIDRGL QLVQHSTRLY QRIFDRFVSS QRNVVEQVRK AIAANQIEDA VRIAHTLKGL AGNLSSAKLV ELARLLELHL TENAPFEDEL VQIQPLVASI CDAIEYAKPA AVNQAEPQAV DLLSAEDLRA ALQALRQNLD DADASAVAKI DALKPQVSSA MWQALSPALS MINQYQFDEA IDLIDDVIAQ LG
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