| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0820 |
|---|
| Symbol | |
|---|
| ID | 5371006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 970294 |
|---|
| End bp | 972387 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640829015 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001365037 |
|---|
| Protein GI | 152999356 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000394199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT TATCCAAATA CAGAAACATT GGTATCTTCG CTCACGTTGA CGCGGGTAAA
ACCACGACCA CCGAGCGTAT CCTTAAGCTA ACCGGTAAAA TCCATAAAAT CGGTGAAGTT
CACGATGGTG AATCTACCAC TGACTTCATG GTACAGGAAG CTGAGCGCGG TATTACTATT
CAGTCTGCTG CTGTAAGTTG CTTCTGGAAA GATCACCGTT TCAACGTTAT CGACACCCCA
GGACACGTTG ACTTCACAGT TGAAGTTTAT CGTTCTCTGA AAGTGCTTGA TGGCGGTATC
GGTGTATTCT GTGGTTCAGG CGGTGTTGAG CCTCAATCAG AAACTAACTG GCGCTATGCG
AACGAATCTG AAGTTGCTCG TATCATCTTC GTGAACAAGT TAGACCGTAT GGGTGCTGAC
TTCTTACGTG TTGTTAAGCA AACTAAAGAC GTATTAGCTG CAACTCCACT GGTTATGGTT
TTACCAATCG GTGTTGAAGA TGAATTCACC GGTGTTGTTG ACCTGTTAAC TCGTAAAGCA
TACGTGTGGG ATGATTCTGG TCTGCCAGAA AACTTCGAAG TATTAGACGT GCCTGCTGAC
ATGGTTGACA TGGTTGAAGA ATACCGTGAA ATGCTGATCG AAACAGCTGT TGAGCAAGAC
GATGCAGTGA TGGAAGCGTA CATGGAAGGC GAAGAGCCAT CTATGGAAGA CATCAAGCGT
TGTATCCGTA CTGGTACTCG TAAACTTGCA TTCTTCCCAA CATACTGTGG TTCTGCGTTC
AAGAACAAAG GTATGCAACT GGTTCTTGAT GCTGTTGTTG ATTATTTACC AGCACCAGAC
GAAGTTGATC CACAACCACT GACTGACGAA GAAGGCAACG AAACTGGCGA ATTCGCTATC
GTTTCTGCTG ATGAGCCATT GAAAGCGTTA GCGTTCAAAA TCATGGATGA CCGTTTCGGC
GCCCTGACTT TCGTACGTAT CTATTCTGGC CGTCTGAAGA AGGGTGATAC CATCCTGAAC
AGCGCTACTG GCAAAACTGA ACGTATCGGC CGTATGTGCG AAATGTACGC TGACGACCGT
ATCGAAATTG AATCAGCTCA AGCTGGCGAC ATTATCGCTA TCGTGGGTAT GAAGAACGTT
CAAACTGGTC ACACTCTGTG TGATGTTAAA CACCCTGTTA CCTTAGAAGC TATGGTGTTC
CCAGAGCCAG TTATCTCTAT CGCAGTAGCG CCAAAAGATA AAGGCGGTTC TGAGAAAATG
GGTATCGCTA TCGGTAAGAT GATCGCTGAA GATCCATCAT TCCGCGTAGA AACTGACGAA
GATTCAGGTG AAACCATCCT TAAAGGTATG GGCGAACTTC ACTTAGATAT CAAAGTAGAC
ATTCTGAAGC GTACTTATGG CGTTGAATTG ATCGTAGGTG AGCCACAAGT TGCTTACCGT
GAAACCATTA CTCAAATGGT TGAAGATCAA TACACTCACA AGAAACAATC TGGTGGTTCT
GGTCAATTCG GTAAGATCGA ATATATCATC CGCCCAGGTG AAGCAAACAC TGGTTTCGTG
TTCAAATCTT CAGTAGTTGG TGGTAGCGTT CCGAAGGAAT TCTGGCCAGC AGTTGAGAAA
GGTTTCGCGA GCATGATGAA CACAGGTACT ATCGCTGGCT TCCCAGTGTT AGACGTTGAG
TTCGAATTAA CTGACGGTGC TTTCCACGCA GTTGACTCAT CAGCAATCGC GTTCGAAATC
GCTGCTAAAG GCGCTTTCCG TCAGTCTATC GCTAAAGCTA AACCACAACT TCTTGAGCCA
ATCATGAAAG TTGACGTGTT CAGCCCAGAT GACAACGTGG GTGACGTGAT CGGTGACTTA
AACCGTCGTC GCGGCATGAT CAAAGACCAA GTTGCTGGTG TAACAGGTGT TCGCGTTAAA
GCTGACGTAC CGTTATCAGA AATGTTCGGT TATATCGGTA CTTTACGTAC AATGACTTCT
GGTCGTGGTC AGTTCTCTAT GGAGTTCTCA CACTACAGCC AATGTCCAGC TAGCGTAGCT
GAGAAAGTTG TTGCTCAAGT TAAAGAACGT AAAGCTGCTG AAGCTAAGAA GTAA
|
|---|
| Protein sequence | MTELSKYRNI GIFAHVDAGK TTTTERILKL TGKIHKIGEV HDGESTTDFM VQEAERGITI
QSAAVSCFWK DHRFNVIDTP GHVDFTVEVY RSLKVLDGGI GVFCGSGGVE PQSETNWRYA
NESEVARIIF VNKLDRMGAD FLRVVKQTKD VLAATPLVMV LPIGVEDEFT GVVDLLTRKA
YVWDDSGLPE NFEVLDVPAD MVDMVEEYRE MLIETAVEQD DAVMEAYMEG EEPSMEDIKR
CIRTGTRKLA FFPTYCGSAF KNKGMQLVLD AVVDYLPAPD EVDPQPLTDE EGNETGEFAI
VSADEPLKAL AFKIMDDRFG ALTFVRIYSG RLKKGDTILN SATGKTERIG RMCEMYADDR
IEIESAQAGD IIAIVGMKNV QTGHTLCDVK HPVTLEAMVF PEPVISIAVA PKDKGGSEKM
GIAIGKMIAE DPSFRVETDE DSGETILKGM GELHLDIKVD ILKRTYGVEL IVGEPQVAYR
ETITQMVEDQ YTHKKQSGGS GQFGKIEYII RPGEANTGFV FKSSVVGGSV PKEFWPAVEK
GFASMMNTGT IAGFPVLDVE FELTDGAFHA VDSSAIAFEI AAKGAFRQSI AKAKPQLLEP
IMKVDVFSPD DNVGDVIGDL NRRRGMIKDQ VAGVTGVRVK ADVPLSEMFG YIGTLRTMTS
GRGQFSMEFS HYSQCPASVA EKVVAQVKER KAAEAKK
|
|---|
| |