Gene Shew185_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0809 
Symbol 
ID5371415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp948481 
End bp949212 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content49% 
IMG OID640829004 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001365029 
Protein GI152999348 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000013307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTCC CAAGAATTTA TCAACCTCAG CCATTAGCCA TCAATCAACA GTTGAACTTA 
GACGAAGATG GCGCGGCCCA TATCGGTAAA GTGCTGCGTA TGGGTAACGG CGAACATATC
AGCCTATTCA ATGGCGATGG CCATGATTAT CTTGCTGAAA TTGTCGATGC AGGTAAAAAG
CATGTCACAG TAAAACTGCT TTCCTGTGAG GCCAATTTAT CTGAGTCGCC ACTCAACTTG
CACTTAGGCC AAGTGATTTC CCGTGGCGAT AGAATGGAAT TCACCATTCA AAAATCGGTC
GAGCTGGGTG TGAATACCAT TACGCCGCTG TTTTCCGATC GCTGCGGTGT AAAGCTTAAT
GGCGAACGCC TAGAGAAAAA AATTCAACAA TGGCAGAAAA TCGTTGTGAG CGCCTGTGAA
CAATCGGGCC GCAGCCAAGT GCCCGTGGTT CGCCCAGCGA TGGACTTACA CGATTGGTGC
AGTGAGCCAA CCTCGGCACT GAAACTCAAT TTACATCCAC GTGCCGCACA CGGCATCAAT
GGTTTAGATT TAGCGCACAC ACGCGTGCGC CTGTTAATTG GCCCAGAAGG TGGTTTGTCG
GCGGAAGAAA TCGCCATGAC AGAAACCTAT CAATTTACCG ATGTGTTGCT TGGCCCTAGA
GTGCTTCGCA CTGAAACCGC CTCGCTTACG GCCATTACAG CGCTGCAACT TAGATTTGGT
GATTTAGGCT AA
 
Protein sequence
MRVPRIYQPQ PLAINQQLNL DEDGAAHIGK VLRMGNGEHI SLFNGDGHDY LAEIVDAGKK 
HVTVKLLSCE ANLSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN
GERLEKKIQQ WQKIVVSACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN
GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG
DLG