Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0809 |
Symbol | |
ID | 5371415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 948481 |
End bp | 949212 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829004 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001365029 |
Protein GI | 152999348 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000013307 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGTCC CAAGAATTTA TCAACCTCAG CCATTAGCCA TCAATCAACA GTTGAACTTA GACGAAGATG GCGCGGCCCA TATCGGTAAA GTGCTGCGTA TGGGTAACGG CGAACATATC AGCCTATTCA ATGGCGATGG CCATGATTAT CTTGCTGAAA TTGTCGATGC AGGTAAAAAG CATGTCACAG TAAAACTGCT TTCCTGTGAG GCCAATTTAT CTGAGTCGCC ACTCAACTTG CACTTAGGCC AAGTGATTTC CCGTGGCGAT AGAATGGAAT TCACCATTCA AAAATCGGTC GAGCTGGGTG TGAATACCAT TACGCCGCTG TTTTCCGATC GCTGCGGTGT AAAGCTTAAT GGCGAACGCC TAGAGAAAAA AATTCAACAA TGGCAGAAAA TCGTTGTGAG CGCCTGTGAA CAATCGGGCC GCAGCCAAGT GCCCGTGGTT CGCCCAGCGA TGGACTTACA CGATTGGTGC AGTGAGCCAA CCTCGGCACT GAAACTCAAT TTACATCCAC GTGCCGCACA CGGCATCAAT GGTTTAGATT TAGCGCACAC ACGCGTGCGC CTGTTAATTG GCCCAGAAGG TGGTTTGTCG GCGGAAGAAA TCGCCATGAC AGAAACCTAT CAATTTACCG ATGTGTTGCT TGGCCCTAGA GTGCTTCGCA CTGAAACCGC CTCGCTTACG GCCATTACAG CGCTGCAACT TAGATTTGGT GATTTAGGCT AA
|
Protein sequence | MRVPRIYQPQ PLAINQQLNL DEDGAAHIGK VLRMGNGEHI SLFNGDGHDY LAEIVDAGKK HVTVKLLSCE ANLSESPLNL HLGQVISRGD RMEFTIQKSV ELGVNTITPL FSDRCGVKLN GERLEKKIQQ WQKIVVSACE QSGRSQVPVV RPAMDLHDWC SEPTSALKLN LHPRAAHGIN GLDLAHTRVR LLIGPEGGLS AEEIAMTETY QFTDVLLGPR VLRTETASLT AITALQLRFG DLG
|
| |