| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0803 |
|---|
| Symbol | |
|---|
| ID | 5372667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 940670 |
|---|
| End bp | 941812 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640828998 |
|---|
| Product | peptidase M50 |
|---|
| Protein accession | YP_001365023 |
|---|
| Protein GI | 152999342 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1994] Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGA AATTGGAACT ACTTAAGATT GACTGCTTAG GCAAACAACT GCGCTTAGAA
GGCTCACTCG CGGGCTGGCA ACAACTCTTC TGGGACAACA CCTTAGTCTC ACAAAAAGAA
GCTTCCGTCG ACAATGGCGG CCTCAAGGTT CATGTCTTTG AGCTCACCCA CCACAGCAGT
CCATTGGCGA CAGAAAGTGG CGAGCAAGCC ATCGCCATGA CAGAAAATAA AATTCAAGTT
CGCCTCGAAA CCGATCTCGT TTGGCAGCCT TTCCGCCTCG ATTACTGCTT GCTGCAGGAT
GACAAAATTA TCGACCAAGG CCGACGCACC GAAAAAGATA TCGAACGCCA AACTCCTGAA
ACGCCAATCG TTAAGCAGCA AAAACTGAGC ATGGTTGGAC TCGCCTCCCT TGGTTTTAAA
CTGTTAAAAA GCGCCAAAGT CATAAAAGTG GTATTAGCGG GCGCCAGCGT TGCGGCTTAT
TCTTGGCTAT TCTCCTTCCA ATTTGCCCTC GCGCTCATCG CCTGCTTGGT ATTCCACGAA
TACGGCCATA TCCGCGCGAT GAAATATTTT GGGATGAAGA CCAAAGGGAT TTACCTTATT
CCCTTTATGG GTGGGCTCGC GCTCTCCGAT GAAAAAATTA ATACGCGTTG GCAAGATGTG
GTTATTTCCA TCATGGGGCC AACCTTTGGA CTCCTGATGT CCATCGCGTC CTTGATTGCT
TACCACGCCA CGGGCAATGT GTTTTTTGCT GGCCTAGCCG CCTTTAATGC GCTGCTTAAC
CTATTTAATT TATTGCCAAT TTTACCACTC GATGGCGGGC ATATTTTAAA GAGCATCAGT
TTTTCGATGA ACAGCATCAT GGGCTTAGTC GCCTGCGCCG CCGGTGCCGC TTTCGGTGTG
TATATCAGCT ACACCTTAGG CTTAGCCTTA TTGGGATTCT TGTTGTTGAT CGGCAGCTTA
GAAATCATTT TCGAGTGGCG CACTCGCCAT CAAAGCCACC TGCTGCCGTT AGACAGATAC
GGACAAATCT TCTCGGTGAT TTGGTACTTG CTCACAGTTG GCGCTTTAGT CGGCATCATC
TGGCACTTAG CCGGAACCGG CGATGATATG CTCAGTCTGC CGCTGCAAAT ATTACGCAGC
TAA
|
|---|
| Protein sequence | MEPKLELLKI DCLGKQLRLE GSLAGWQQLF WDNTLVSQKE ASVDNGGLKV HVFELTHHSS
PLATESGEQA IAMTENKIQV RLETDLVWQP FRLDYCLLQD DKIIDQGRRT EKDIERQTPE
TPIVKQQKLS MVGLASLGFK LLKSAKVIKV VLAGASVAAY SWLFSFQFAL ALIACLVFHE
YGHIRAMKYF GMKTKGIYLI PFMGGLALSD EKINTRWQDV VISIMGPTFG LLMSIASLIA
YHATGNVFFA GLAAFNALLN LFNLLPILPL DGGHILKSIS FSMNSIMGLV ACAAGAAFGV
YISYTLGLAL LGFLLLIGSL EIIFEWRTRH QSHLLPLDRY GQIFSVIWYL LTVGALVGII
WHLAGTGDDM LSLPLQILRS
|
|---|
| |