| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0802 |
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| Symbol | |
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| ID | 5372126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 939099 |
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| End bp | 940529 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828997 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001365022 |
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| Protein GI | 152999341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.102308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA AAATATTTAA TCGACACTTT TCGCCTCGTA GCTGCGCGAT TGCTGTGGGC
ATGGCTTTAG GAATCGCCTT GCTGAGTGGC TGTGGCAGTT TCATGCGTTC AGACTTTGAA
CCGCCCGCAT TGGCGATTCC TGAACAGTGG CAAAACACCA CAGTGAACGA GCAAGTAAAG
GTCGATCCTT GGTGGCAGCA GTTTCATCAG CCTGAGCTCG ATAAGCTGGT TAGCCAAGTG
TTGAGCACCA ACAATGACTT AACGCTGGCG ACTTTAACGC TGCGTAAAGC GCGCTTGCAG
GCAGGGCTAA CGCGGGACGA TCTGTATCCG CAATTATCGG CCAATCTTGG GGCTTCGCGT
AATCAGCCAC TTGATGGCGG CGACGCAACT AAGAGTTATC AAGCCAACTT GTCTGTCAGT
TATGAGGTGG ATTTGTGGGG CAAAGTGTCG GCCAATATCG ATCAAGCCCA ATGGGCGGCG
CTGGCGAGCG CTGAAGATAG GGAAAGCACC ACCCAAAGTC TAGTGGCGAC CACTACATCC
TTGTACTGGC AGATAGGTTA TTTAAATCAA CGGGTTGATT TAAGCCAAAA GAGCATAGCG
TACAGCAAGC AAACGCTGGC TTTAACCCAA AGGCAGTATG ATTCTGGCGC CGTGACGCAA
GTGAATGTGC TCGAAGCGCA GCGCAGCATG GCGGGACAAG AGGCGGCCCA TAGTCAGCTT
ATCCAGCAAT TAACTGTGGC TAAAAATGCC CTCGCGATAT TACTCAATCA GGCGCCTGCT
GACCCAGCGC AGAGTTTAGC TGAGATTAAA CAGCTCCCCG ACGTGGCAGT GCCGGACGTT
AGCGTGGGTG TACCAGCAGA TTTGTTAGTC AGACGCCCAG ATGTGAAGGC TTCCTTGTAT
CAACTGCGCT CCGCCTTGGC GAGTAAAGAC GCTACCTATG CGAGTTATTT CCCAAGCCTG
AGTTTAACGG GTGGAGTTGG GGAGTCGACC TCAGAGTTAA AAGAGCTGTT ACGCAATCCC
GTTGGTAGCT TAGGCGCTGG GCTTGTCTTG CCCTTTTTGC AGTGGAATCA AATGCAAATC
AATAACGACA TTGCCGATAT TGATTATCAA ACCGCTGTGG TGAATTATCG CAAGACGCTC
TATTCCGCCT TTGAAGATGT CGATAACGCG ATTTCGGCAA AGCAACAATA TCGCTATCAA
GGGGAGAAGT TGGAGCAGCA ATTCAGTGCG GCGGCAGCCG TTGAAGCCAT TTATGAGAGT
CAGTACCGCA ATGGCGCTAT CGGTATTCAG AATTGGATTG ATGCCCAAGA GAATCGTCGC
AGCGCCGAGG CGGCTTTGCT CGAGAATCGT TACAATCAAC TCACCGCCCA AGCGACGCTT
TATCAAGCCC TTGGCGGCAG CGATATCGCC CCGCCTTTGG CAAAGGAATA A
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| Protein sequence | MNTKIFNRHF SPRSCAIAVG MALGIALLSG CGSFMRSDFE PPALAIPEQW QNTTVNEQVK
VDPWWQQFHQ PELDKLVSQV LSTNNDLTLA TLTLRKARLQ AGLTRDDLYP QLSANLGASR
NQPLDGGDAT KSYQANLSVS YEVDLWGKVS ANIDQAQWAA LASAEDREST TQSLVATTTS
LYWQIGYLNQ RVDLSQKSIA YSKQTLALTQ RQYDSGAVTQ VNVLEAQRSM AGQEAAHSQL
IQQLTVAKNA LAILLNQAPA DPAQSLAEIK QLPDVAVPDV SVGVPADLLV RRPDVKASLY
QLRSALASKD ATYASYFPSL SLTGGVGEST SELKELLRNP VGSLGAGLVL PFLQWNQMQI
NNDIADIDYQ TAVVNYRKTL YSAFEDVDNA ISAKQQYRYQ GEKLEQQFSA AAAVEAIYES
QYRNGAIGIQ NWIDAQENRR SAEAALLENR YNQLTAQATL YQALGGSDIA PPLAKE
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