| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0789 |
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| Symbol | |
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| ID | 5371734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 923040 |
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| End bp | 924080 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640828983 |
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| Product | porin |
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| Protein accession | YP_001365009 |
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| Protein GI | 152999328 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000129455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAT TGGCATTGGC TTCATTCGGT
GCGCTAGCCG AAGGCCCAAG CTTCTATGGT CGTTTAGAGC TTGCTTTAAC CCATACTGAC
ACTGGCGCTA CCCTACAAAG CGGTACTAAC GGTCTTGATA TTGGCGAAAA AGGCACTTAT
TTAGAAAACA ACTTTTCTCT ATTAGGTGTT AAAGGCTCAG AAAAAATCGC CGATGGCTTT
GACGTTATTT ACCAAATGGA ATTCCAAGTT GAAAACACTT CCAGCAAGGG AGATGTTTTT
AAAGCGCGTA ATACTTATTT AGGTTTGAAA ACTAACGCAG GTACAGTGTT AGTGGGTCGT
AACGACACAG TATTCAAACA AGCCGAAGGC GGCGTGGATA TTTTCGGTAA CACTAACGCC
GATATCGACC GTCTAATCAG TGGTCAAACA CGTAGCGCTG ATGGTGTATG GTATTACTCA
CCAAAAATCG CTGGCTTAGT GACATTAAAC GCAACTTATT TATTCGATGA TAATGACACT
ACTGCGAAAA CCACAGAAAG CCTATATGCA TTAAGCGCAA CTTTAGGTGA TAAAGCGTTT
AAAGCACAGA ACTATTATGC AGCCGTAGCA TATAACAAAG GTATCGATTC AATTGAAGCA
TACCGTGGTG TGGCTCAAGT TAAATTGGGC CAATTCAAAG TCGGTGGTTT ATTCCAAAAC
TCTGAAAGTA TTACAGACAG CTCTGTTGAC GGTAACACAT ATTTTGTTAA CGTTGCGTAT
GACCTGAACG GTGTAAACCT GAAGGCCGAA TACGGTGTTG ACGAAGCTGG CTTTGGTAAA
TACTACAAAG CACTAGGCAA AGCTGGTGCT GATGATATCA ACGTACAAAA CTTCAACGTA
GGTGCAGACT ACCGTTTATC TAAATCAACT ATGGTATATG GCCAATACGC TATGTACAAA
GGCGATTATA AAGATGCCGG TGCTAAGTTT GACCTAGAAG ATGACAACGT ATTCTCTGTA
GGCGTACGTT ACGACTTCTA A
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| Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTHTD TGATLQSGTN GLDIGEKGTY
LENNFSLLGV KGSEKIADGF DVIYQMEFQV ENTSSKGDVF KARNTYLGLK TNAGTVLVGR
NDTVFKQAEG GVDIFGNTNA DIDRLISGQT RSADGVWYYS PKIAGLVTLN ATYLFDDNDT
TAKTTESLYA LSATLGDKAF KAQNYYAAVA YNKGIDSIEA YRGVAQVKLG QFKVGGLFQN
SESITDSSVD GNTYFVNVAY DLNGVNLKAE YGVDEAGFGK YYKALGKAGA DDINVQNFNV
GADYRLSKST MVYGQYAMYK GDYKDAGAKF DLEDDNVFSV GVRYDF
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