| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0788 |
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| Symbol | |
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| ID | 5371733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 920588 |
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| End bp | 922864 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828982 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001365008 |
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| Protein GI | 152999327 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00268436 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACG CTATCAAGTT AAGTCTCGAT GGGGTAGAGC AAATGCCATT ACGGCGCTTT
ACCGAAGAGG CTTATCTGAA CTATTCCATG TACGTCATTA TGGACCGAGC CCTGCCACAC
ATTGGTGATG GGCTTAAACC GGTACAGCGT CGAATTATAT ATGCGATGAG TGAGTTAGGT
TTATCGGCTC AATCTAAGCA TAAAAAGTCG GCACGGACGG TCGGTGACGT ATTAGGTAAA
TACCATCCCC ACGGCGATAG CGCCTGTTAT GAGGCTATGG TATTGATGGC GCAGCCATTC
TCCTATCGTT ATCCGTTAGT CGATGGTCAA GGTAACTGGG GGGCGCCCGA TGATCCTAAG
TCATTTGCGG CCATGCGTTA CACCGAAGCG CGTTTATCTA AATTCTCCGA AGTGCTGCTC
AGCGAGCTGG GGCAAGGCAC GGTTGAGTGG GGCGCTAACT TTGATGGCAC GTTAAAAGAG
CCAAAAGTAT TGCCGGCACG TTTACCGCAT ATTTTACTCA ATGGTATTAC TGGTATTGCG
GTGGGTATGG CGACGGATAT TCCGCCGCAT AACGTCAGGG AATTAGTCTC CGCTTGCGTC
GCATTGCTTG ATGATCCTAA GCTTGAACTC GAGCAATTGA TGGCCTTTGT ACCTGGGCCA
GATTATCCGA CCGAAGCCGA GATCATTACC CCGTCTGCCG ATATTGCAAA GATTTATGAA
TCGGGCCGTG GGTCATTAAG AGCGCGCGCG GTTTACACAG TCGATGGTGG TGAAATCATC
ATTACTGCGC TGCCGCATCA AGCCAGTAGC GGTAAAATTT TAGAGCAAAT TGCCGGCCAA
ATGCAGGCGA AGAAATTGCC TATGGTGGCC GATTTACGCG ATGAGTCGGA TCATGAAAAC
CCAGTGCGGC TGGTGGTCGT GCCGCGCTCA AATCGTGTCG ATTGCGATCA GTTAATGGCG
CATTTGTTTG CTACCACGGA TTTAGAAAAG AGCTTTAGAG TTAACTTAAA CGTGCTGGGT
CTCGATGGTC GTCCACGGGT TAAAGGGCTA AAAACCTTAT TAACTGAGTG GTTAGAGTTC
CGAGTCGACA CGGTTAAACG TCGTTTGGAA TACCGTTTAG ATAAAGTCGT GTCGCGGTTA
CACATACTCG AAGCGTTAAT GATCGCTTTT CTCAACATTG ATGAAGTGAT TGAGATTATT
CGTTTTCACG ATGAGCCTAA AGCCGAGTTA ATGGCCCGTT TCTCACTCAG TGATAAACAA
GCTGAATCGA TCCTCGAGTT AAAGTTACGT CATTTAGCTA AGTTAGAAGA ATTTAAGATC
ACGGCCGAGC AGAATGAGCT TGAAGCCGAG CGCGAGAAAC TCGAGCAGTT ATTGGGTTCA
GAGCGTCGCT TGAAGACCTT GATCAAGAAA GAATTAATTC AAGATGCCGA AACCTACGGT
GATGATCGTC GCTCTCCAAT AGTGCTGCGC AACGAGTCTC GCGCCTTAAC GGAACAAGAG
TTAACGCCGA CTGAGGCTGT GACAGTGGTC TTGTCTGAAA AAGGCTGGGT GCGTTGTGCT
AAGGGCCACG ATATCGATCC ATTATCGCTC TCCTATAAGT CTGGCGACCA ATACTTGTGC
AGTGCCATAG GGCGTAGTAA TCAGGCGGCT GTGTTTATTG ATTCGTCTGG GCGGGCATTT
GCGACCGACA GTCATACTTT ACCATCGGCC CGTAGCCAAG GTGAGCCTAT CACGACTCGT
TTCAATATGG CGCCTGGCGA AACCATGCAG CATGTATTGA TGGGTGAGGA AGACCAATGT
TATCTGTTGG CAACTGACGC GGGCTACGGT TTTATTTGCT CGTACAATGA TATGGTGTCG
CGCAATAAGG CGGGTAAGGC ATTACTGAGT TTGCCGACAA ACGCTAAGTC ATTAACGCCT
AAGTTGATTG ATCGCACGAA GGAAATGTCG CTCTTAGCGA TCACGAACGA AGGTCGAATG
TTGTTGTTCT CCCTTGAGGC CTTACCGCAA TTATCTAAGG GGAAAGGTAA CAAGATTATC
GGCATTCCTA CGGAAAGAGC CAAGAACCGT GAAGAGCTGA TGACGCACTT ACAATTAGTG
CCGAGTGATA CGCCAGTCAC CTTGTGGGCG GGTAAGCGCA AACTCACACT TAAGCCTAGC
GATCTTGAGC ATTATCGTGG AGAACGTGGT CGTCGTGGGG CTAAATTGCC AAGGGGCTTA
CAACGTGTCG ATAGCGTTGA ATTAGGTGAC GGCGGCGAGC CATTACCGAG CATTTAA
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| Protein sequence | MSDAIKLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVEW GANFDGTLKE PKVLPARLPH ILLNGITGIA
VGMATDIPPH NVRELVSACV ALLDDPKLEL EQLMAFVPGP DYPTEAEIIT PSADIAKIYE
SGRGSLRARA VYTVDGGEII ITALPHQASS GKILEQIAGQ MQAKKLPMVA DLRDESDHEN
PVRLVVVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KTLLTEWLEF
RVDTVKRRLE YRLDKVVSRL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFSLSDKQ
AESILELKLR HLAKLEEFKI TAEQNELEAE REKLEQLLGS ERRLKTLIKK ELIQDAETYG
DDRRSPIVLR NESRALTEQE LTPTEAVTVV LSEKGWVRCA KGHDIDPLSL SYKSGDQYLC
SAIGRSNQAA VFIDSSGRAF ATDSHTLPSA RSQGEPITTR FNMAPGETMQ HVLMGEEDQC
YLLATDAGYG FICSYNDMVS RNKAGKALLS LPTNAKSLTP KLIDRTKEMS LLAITNEGRM
LLFSLEALPQ LSKGKGNKII GIPTERAKNR EELMTHLQLV PSDTPVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVELGD GGEPLPSI
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