Gene Shew185_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0786 
Symbol 
ID5371481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp917482 
End bp919368 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content48% 
IMG OID640828980 
ProductDNA topoisomerase IV subunit B 
Protein accessionYP_001365006 
Protein GI152999325 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATC AATACACCTC TGACGCCATT GAAGTTCTCA ACGGACTCGA TCCTGTTAAA 
CGCCGTCCAG GTATGTATAC CGACACCTCC AGACCGAACC ATTTGGGCCA AGAGGTCATA
GACAACAGTG TCGATGAAGC ATTAGCGGGC CACGCGACCA AAATTGAAGT TGTTCTACAT
ACAGATAACT CCCTCGAAGT CACCGATGAT GGCCGTGGTA TGCCGGTGGA TATCCACCTT
GAAGAAGGCA TTCCTGGGGT CGAGTTAATC CTGACCAAAT TGCATGCCGG CGGTAAATTT
TCGAATAAAA ACTACCAGTT CTCTGGCGGT TTGCATGGTG TGGGGATTTC AGTCGTTAAC
GCGCTGTCGC GCCGTGTTGA AGTGACAGTT CGCCGTGATG GCCAAGTGTA TGATATTGCA
TTTGAAAATG GCTTTAAGGT TGAAGAGTTA CGCCCAACGG GAACTTGTGG TCGTCGCAAT
ACCGGAACAC GAGTGCATTT TTGGCCCGAC GCCAGCTATT TTGATTCGGC TAACTTTTCT
AATTCAAAAC TGATTTATCT GCTGCGGGCT AAAGCGGTCC TGTGCCCAGG CTTACGGATT
AAATTCACCA ACAAACAGAC AAATGAAGTC CATGAATGGT TCTATGAAAG CGGCCTAACC
GATTATTTGA AGGCGGCGAT TGGCGATAAT TTAAGGTTGC CAGATGAGCC GTTTGTCGGT
TGTTTTAAGG GCCAGCTAGA AGCCGCTGAT TGGGCGATTA CTTGGTTGCC AGAAGGCGGT
GAATCCATTG GCGAGAGTTA TGTTAACTTA ATTCCGACTC CGCTCGGTGG TACCCATGTG
AATGGTTTCC GCCAAGGCTT ATTGGAGTCA ATGCGCGAAT TTTGTGAGTT CAGAAACTTA
ATTCCTCGCG GCATTAAACT TTCACCTGAA GACATTTGGG ATCGCGCCGC ATTTATTTTG
TCGGTGAAGA TGCAAGAACC GCAGTTTGCT GGCCAAACCA AAGAAAAGCT TTCTAGCCGT
CAATGCGCCG CATTTGTGTC TGGCGTCGTG CGTGATGCCT TTTCACTCTG GTTGAACTCA
AATACCGAAC TCGCTGAATC GTTAGCCGAA ATGTGCATTA ATAATGCCCA GAGTCGGTTA
AAGGCCGCCA AAAAAGTCGC CCGCAAAAAG GTGACTTCAG GGCCTGCACT GCCGGGTAAG
CTAACGGACT GTAGTGGCCA AGATCCAATG CGCGGAGAGT TATTCCTCGT GGAAGGGGAT
TCTGCGGGTG GCAGTGCGAA ACAGGCTCGC GATCGTGAGT TTCAAGCCAT TATGCCGCTG
CGTGGGAAAA TCTTAAACAC TTGGGAAGTT GATGCTTCAC AAGTGTTAGC CTCGCAGGAA
GTCCATGATA TTTCGGTCGC AATTGGTTGT GATCCCGATA GCAGTGATAT CTCCGAACTA
CGTTATGGCA AGATTTGTAT CCTTGCGGAT GCTGACTCCG ACGGATTGCA CATTGCTACT
TTATTATGCG CGCTATTTTT GAAGCATTAC CGTATCTTGG TTGAACAGGG ACATGTGTAT
ATTGCCATGC CGCCACTGTT CCGTATCGAT ATCGGCAAAG AGGTGTATTA CGCCTTAGAT
GAAGCCGAAA GAGCGGGGAT TTTAGATCGC ATTGCTGCTG AGAATAAAAA GGGCAAGGTA
CAAGTCACCC GCTTTAAAGG CTTGGGTGAG ATGAACCCTT TACAACTTCG TGAAACAACG
ATGGATCCGA ACACCCGTCG TTTAGTACAG TTGACCATAG ATGATATCGA AGAGACAGAT
GCTTTGATGG ATATGTTGCT CGCTAAGAAG CGTTCGCCGG ACCGTAAAAA CTGGCTTGAA
GATAAGGGTG ACATGGCTTT ACTTTAA
 
Protein sequence
MTNQYTSDAI EVLNGLDPVK RRPGMYTDTS RPNHLGQEVI DNSVDEALAG HATKIEVVLH 
TDNSLEVTDD GRGMPVDIHL EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN
ALSRRVEVTV RRDGQVYDIA FENGFKVEEL RPTGTCGRRN TGTRVHFWPD ASYFDSANFS
NSKLIYLLRA KAVLCPGLRI KFTNKQTNEV HEWFYESGLT DYLKAAIGDN LRLPDEPFVG
CFKGQLEAAD WAITWLPEGG ESIGESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL
IPRGIKLSPE DIWDRAAFIL SVKMQEPQFA GQTKEKLSSR QCAAFVSGVV RDAFSLWLNS
NTELAESLAE MCINNAQSRL KAAKKVARKK VTSGPALPGK LTDCSGQDPM RGELFLVEGD
SAGGSAKQAR DREFQAIMPL RGKILNTWEV DASQVLASQE VHDISVAIGC DPDSSDISEL
RYGKICILAD ADSDGLHIAT LLCALFLKHY RILVEQGHVY IAMPPLFRID IGKEVYYALD
EAERAGILDR IAAENKKGKV QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDIEETD
ALMDMLLAKK RSPDRKNWLE DKGDMALL