Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0786 |
Symbol | |
ID | 5371481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 917482 |
End bp | 919368 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828980 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_001365006 |
Protein GI | 152999325 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAATC AATACACCTC TGACGCCATT GAAGTTCTCA ACGGACTCGA TCCTGTTAAA CGCCGTCCAG GTATGTATAC CGACACCTCC AGACCGAACC ATTTGGGCCA AGAGGTCATA GACAACAGTG TCGATGAAGC ATTAGCGGGC CACGCGACCA AAATTGAAGT TGTTCTACAT ACAGATAACT CCCTCGAAGT CACCGATGAT GGCCGTGGTA TGCCGGTGGA TATCCACCTT GAAGAAGGCA TTCCTGGGGT CGAGTTAATC CTGACCAAAT TGCATGCCGG CGGTAAATTT TCGAATAAAA ACTACCAGTT CTCTGGCGGT TTGCATGGTG TGGGGATTTC AGTCGTTAAC GCGCTGTCGC GCCGTGTTGA AGTGACAGTT CGCCGTGATG GCCAAGTGTA TGATATTGCA TTTGAAAATG GCTTTAAGGT TGAAGAGTTA CGCCCAACGG GAACTTGTGG TCGTCGCAAT ACCGGAACAC GAGTGCATTT TTGGCCCGAC GCCAGCTATT TTGATTCGGC TAACTTTTCT AATTCAAAAC TGATTTATCT GCTGCGGGCT AAAGCGGTCC TGTGCCCAGG CTTACGGATT AAATTCACCA ACAAACAGAC AAATGAAGTC CATGAATGGT TCTATGAAAG CGGCCTAACC GATTATTTGA AGGCGGCGAT TGGCGATAAT TTAAGGTTGC CAGATGAGCC GTTTGTCGGT TGTTTTAAGG GCCAGCTAGA AGCCGCTGAT TGGGCGATTA CTTGGTTGCC AGAAGGCGGT GAATCCATTG GCGAGAGTTA TGTTAACTTA ATTCCGACTC CGCTCGGTGG TACCCATGTG AATGGTTTCC GCCAAGGCTT ATTGGAGTCA ATGCGCGAAT TTTGTGAGTT CAGAAACTTA ATTCCTCGCG GCATTAAACT TTCACCTGAA GACATTTGGG ATCGCGCCGC ATTTATTTTG TCGGTGAAGA TGCAAGAACC GCAGTTTGCT GGCCAAACCA AAGAAAAGCT TTCTAGCCGT CAATGCGCCG CATTTGTGTC TGGCGTCGTG CGTGATGCCT TTTCACTCTG GTTGAACTCA AATACCGAAC TCGCTGAATC GTTAGCCGAA ATGTGCATTA ATAATGCCCA GAGTCGGTTA AAGGCCGCCA AAAAAGTCGC CCGCAAAAAG GTGACTTCAG GGCCTGCACT GCCGGGTAAG CTAACGGACT GTAGTGGCCA AGATCCAATG CGCGGAGAGT TATTCCTCGT GGAAGGGGAT TCTGCGGGTG GCAGTGCGAA ACAGGCTCGC GATCGTGAGT TTCAAGCCAT TATGCCGCTG CGTGGGAAAA TCTTAAACAC TTGGGAAGTT GATGCTTCAC AAGTGTTAGC CTCGCAGGAA GTCCATGATA TTTCGGTCGC AATTGGTTGT GATCCCGATA GCAGTGATAT CTCCGAACTA CGTTATGGCA AGATTTGTAT CCTTGCGGAT GCTGACTCCG ACGGATTGCA CATTGCTACT TTATTATGCG CGCTATTTTT GAAGCATTAC CGTATCTTGG TTGAACAGGG ACATGTGTAT ATTGCCATGC CGCCACTGTT CCGTATCGAT ATCGGCAAAG AGGTGTATTA CGCCTTAGAT GAAGCCGAAA GAGCGGGGAT TTTAGATCGC ATTGCTGCTG AGAATAAAAA GGGCAAGGTA CAAGTCACCC GCTTTAAAGG CTTGGGTGAG ATGAACCCTT TACAACTTCG TGAAACAACG ATGGATCCGA ACACCCGTCG TTTAGTACAG TTGACCATAG ATGATATCGA AGAGACAGAT GCTTTGATGG ATATGTTGCT CGCTAAGAAG CGTTCGCCGG ACCGTAAAAA CTGGCTTGAA GATAAGGGTG ACATGGCTTT ACTTTAA
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Protein sequence | MTNQYTSDAI EVLNGLDPVK RRPGMYTDTS RPNHLGQEVI DNSVDEALAG HATKIEVVLH TDNSLEVTDD GRGMPVDIHL EEGIPGVELI LTKLHAGGKF SNKNYQFSGG LHGVGISVVN ALSRRVEVTV RRDGQVYDIA FENGFKVEEL RPTGTCGRRN TGTRVHFWPD ASYFDSANFS NSKLIYLLRA KAVLCPGLRI KFTNKQTNEV HEWFYESGLT DYLKAAIGDN LRLPDEPFVG CFKGQLEAAD WAITWLPEGG ESIGESYVNL IPTPLGGTHV NGFRQGLLES MREFCEFRNL IPRGIKLSPE DIWDRAAFIL SVKMQEPQFA GQTKEKLSSR QCAAFVSGVV RDAFSLWLNS NTELAESLAE MCINNAQSRL KAAKKVARKK VTSGPALPGK LTDCSGQDPM RGELFLVEGD SAGGSAKQAR DREFQAIMPL RGKILNTWEV DASQVLASQE VHDISVAIGC DPDSSDISEL RYGKICILAD ADSDGLHIAT LLCALFLKHY RILVEQGHVY IAMPPLFRID IGKEVYYALD EAERAGILDR IAAENKKGKV QVTRFKGLGE MNPLQLRETT MDPNTRRLVQ LTIDDIEETD ALMDMLLAKK RSPDRKNWLE DKGDMALL
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