| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0774 |
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| Symbol | |
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| ID | 5370828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 908302 |
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| End bp | 909321 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828968 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001364994 |
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| Protein GI | 152999313 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.638276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAG ATAAAACCCA GCAATACCAA GGTTTAGCAC CTAAAACCCT CGATAGAACC
TTTTCCATTG CGCCCATGCT GGATTGGACT GATCGTCATT ACCGTTATTT TGCACGTTTG
ATGTCGGCTA ATGCATTGTT GTATACGGAA ATGGTGACGA CTGGGGCGAT ATTGCATGGT
CGTGGGGATT ACTTAGCCTA TAACCAAGAA GAACATCCTT TGGCGTTGCA GTTAGGTGGC
TCTAATCCTG TCGATTTGGC GCGTTGCGCT AAACTCGCGG CTGAGCGTGG CTACGATGAA
GTGAACCTCA ATGTGGGTTG TCCTTCCGAT CGAGTGCAGA ATGGTCGCTT TGGCGCGTGT
TTGATGGCTG AACCTGAATT AGTGGCTGAG TGCGTTGATG CCATGAAGCA AGTGGTTGAT
ATTCCTGTGA CTGTTAAGAC ACGTATCGGG ATTGATGAAC AAGACAGTTA TGCATTTTTA
ACCCAGTTTA TCGATGTGGT CAGTGCAAAA GGGTGTACGG ATTTTACTAT TCATGCCCGT
AAGGCTTGGC TTCAAGGTTT GAGTCCGAAA GAGAATCGCG AGATCCCGCC GCTCGATTAT
GAGCGTGTAT ATCAACTCAA GCGCGATTAT CCCACACTTA ATATTGGCAT TAATGGCGGC
GTCACCACAC TTGAGCAAGC GCAACTCCAT TTAGCACAGC TCGATGGGGT AATGATGGGA
CGCGAGGCCT ATCAGAATCC TTATATTCTG GCGCAGGTGG ACCAAGTATT GTGTGGTAGT
CAAAAGGCGG TGATCAGCCG TGAGGATGTG ATTGAGGCTA TGTTGCCTTA TATCGAAGCA
CATTTGCAGT CGGGTGGGCG ACTTAATCAT ATTACTCGCC ATATGATCGG GTTATTCCAA
GGCTTACCGG GTGCCCGTGC GTGGCGTCGT TATTTGAGCG AAAATGCCCA TAAAAACGGC
GCTGGGATAG AAGTGGTAAA GCAGGCCTTT CAGAATATTC AGGCTGAAGT TACAGAGTAA
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| Protein sequence | MNLDKTQQYQ GLAPKTLDRT FSIAPMLDWT DRHYRYFARL MSANALLYTE MVTTGAILHG
RGDYLAYNQE EHPLALQLGG SNPVDLARCA KLAAERGYDE VNLNVGCPSD RVQNGRFGAC
LMAEPELVAE CVDAMKQVVD IPVTVKTRIG IDEQDSYAFL TQFIDVVSAK GCTDFTIHAR
KAWLQGLSPK ENREIPPLDY ERVYQLKRDY PTLNIGINGG VTTLEQAQLH LAQLDGVMMG
REAYQNPYIL AQVDQVLCGS QKAVISREDV IEAMLPYIEA HLQSGGRLNH ITRHMIGLFQ
GLPGARAWRR YLSENAHKNG AGIEVVKQAF QNIQAEVTE
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