| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0756 |
|---|
| Symbol | |
|---|
| ID | 5373530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 889886 |
|---|
| End bp | 891901 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640828950 |
|---|
| Product | peptidase S14 ClpP |
|---|
| Protein accession | YP_001364976 |
|---|
| Protein GI | 152999295 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGTCG CAACGCTGAA CCAGAGTAAT AAACCCGCCA ATAGCTGGTA TAGCCTCAAA
GCCCAAAACG GTAATGCCGA GTTAATGATC TATGACGAGA TTGGCGGCTG GGGCATTAGT
GCGCAACAGT TCGCCCGTGA TCTACAGGCC CTAGGCAAAG TGGGCACCAT TACCGCCCGT
ATTCATTCGC CAGGCGGCGA TGTATTCGAA GGCATGGCGA TTTACAACAT GATCAAAGGC
CACCCAGCGC ACAAAGTTTG CTACATCGAT GGCCTTGCAG CTTCGATGGC CAGTGTGATT
GCCATGGCTT TTGATGAAGT CATCATGCCT GAAAACGCCA TGATGATGGT GCATAAGCCT
TGGGGCGGAA CCCTCGGTGA TGCCGAAGAT ATGCGAAAAT ACGCCGACTT GCTCGATAAG
GTTGAAGGCA ATTTAGTGGG CGCCTACCAA CACAAAACAG GCTTGTCAGA AGATGAACTC
CACGCTCTGT TAGCCGCTGA AACTTGGCTA ACTGGGCGCG AAGCAGTGGA AAAAGGTTTT
GCCAACACCC TCACCGATCC GCTGCAAATG GCGGCATCAC TTAATTCAAA ACGTCTTAAG
GATTTTACTA ATATGCCTGA AGCTCTCAAA AACCTGTTTG CACCGCAGGG TAACAGTGCT
CCCAACCCAC TCGTGCCAGC ACCAGCAGCA CCTAATGCTC AGTTGCCTGC GCCTGCAGCA
ACACAACCTG ATACCACAGC TATTCAAGCG GCTGCGATTG CGTTTAATAC TGAGCGTATG
AACGGTATCA ATGCGGCATT TACTTTCTTT CCTGAGTTAG CAGAGTTACG TAATCAGTGT
ATTGCCGATG CCAACATCAA TGCTGATAAA GCCAAAGACA TGATCTTGGC AAAGTTGGGT
GAGAACACTA CGCCGTGCGC CGTGCAGCCT AAAAGTGTCA TTATTCATGC CAGCAACGGT
AACATCGTGG GTGATTCAAT TCGTGCTCAC TTAATGGCTC GCGCTGGTTA TGAGAAAGCC
GAAGCATCAA ACGGCTATAC CAGCTATAAC TTGAAAGAGT TAGCTCGAGC TTCACTGGGT
GATCGCGGTA TCGGCATGGC TGGGCTTAAT CAAATGCAAA TGGTCGCATT AGCGTTTACT
CATAGCTCAA GTGATTTTGG CAATATCTTG TTAGATGTGG CTAATAAGTC AGTGTTAAAA
GGTTGGACTG CTGCGCAAGA AAGTTTTGAG CGCTTTACCC GTAAAGGCCA GCTTAGTGAC
TTTAAAGTCT CTAAACGTGT TGGTTTGGAA GAATTTGGCA GCTTACGAAA AGTCCGTGAA
GGTGCTGAAT ATAAATATAT TACCCTTGGT GATACAGGTG CAGATATTGC ACTAGCGACC
TACGGTGAAA TTTTCTCTAT CACCCGCCAA TGTATCATTA ATGATGATAT GACAGTGTTG
ACTACCATCC CTGAAAAAAT GGGTGCTGCA GCGAAAGCAA CGATTGGCGA TTTAGTGTTT
GCTATCTTAA CTGGTAACCC GCTGATGGCT GATGGGAAAA ACCTGTTCCA TGCAGACCAT
AAGAACTTAG GTTCAGGCGT ACCCAGTGCG GAAAGTTTAG CGGTATTGGC TGAGTTGATG
GAAAGCCAAA CCACAGGCGG TAAAACGCCA AGGGCACTAA ACATCATGCC TGAGTTTGTT
TTATGTCCAC CTAATCTTAA ACGTACGCTG ACTCAGATCA TTAAATCGAG CTCAGTAAAA
GGTGCTGATA TCAATGCAGG TATTGCTAAT CCTATGCAAG ATTTTGCGGA AGTGATTTCA
GAGTCTCGTC TGAAATTAGT TAGCGATAAG GCTTACTACT TAGCCGCTGG ACAAGGTAAT
GACACCATCG AAGTAGCTTA TCTCGATGGC ATCGACACGC CTTACATCGA ACAGCAACAA
GGCTTTACTG TTGACGGCGT AGCCACCAAA GTGCGCATCG ATGCGGGTGT GGCTCCACTT
GATTACCGTG GCTTGGTGAA ATCAACAGGC GTGTAA
|
|---|
| Protein sequence | MPVATLNQSN KPANSWYSLK AQNGNAELMI YDEIGGWGIS AQQFARDLQA LGKVGTITAR
IHSPGGDVFE GMAIYNMIKG HPAHKVCYID GLAASMASVI AMAFDEVIMP ENAMMMVHKP
WGGTLGDAED MRKYADLLDK VEGNLVGAYQ HKTGLSEDEL HALLAAETWL TGREAVEKGF
ANTLTDPLQM AASLNSKRLK DFTNMPEALK NLFAPQGNSA PNPLVPAPAA PNAQLPAPAA
TQPDTTAIQA AAIAFNTERM NGINAAFTFF PELAELRNQC IADANINADK AKDMILAKLG
ENTTPCAVQP KSVIIHASNG NIVGDSIRAH LMARAGYEKA EASNGYTSYN LKELARASLG
DRGIGMAGLN QMQMVALAFT HSSSDFGNIL LDVANKSVLK GWTAAQESFE RFTRKGQLSD
FKVSKRVGLE EFGSLRKVRE GAEYKYITLG DTGADIALAT YGEIFSITRQ CIINDDMTVL
TTIPEKMGAA AKATIGDLVF AILTGNPLMA DGKNLFHADH KNLGSGVPSA ESLAVLAELM
ESQTTGGKTP RALNIMPEFV LCPPNLKRTL TQIIKSSSVK GADINAGIAN PMQDFAEVIS
ESRLKLVSDK AYYLAAGQGN DTIEVAYLDG IDTPYIEQQQ GFTVDGVATK VRIDAGVAPL
DYRGLVKSTG V
|
|---|
| |