| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0709 |
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| Symbol | |
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| ID | 5369481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 851100 |
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| End bp | 852542 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828903 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001364929 |
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| Protein GI | 152999248 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0602177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATC CGCTGCGCAC TTTCGCCTCT TTATATAGCA CCACCTTGTT AATGGTACTG
GCCGGCGGTT TGCTCACAAC TTACCTTGGG CTCAGGCTCT CGGTGATGAA TGTGCCACAG
ATATGGATAG GCGGCATGAT GTCGGCCTAT TATGTTGGCC TTGTGGCGGG CTCTAAGATT
GGTCATAGAC TTATCGCCCA AGTGGGTCAT ATACGCGCCT TCGTTGCCAG TGCAGGTATA
GTCGCGGCAT CTGCATTGGG TCATGCACTC GTGGATGAGT TAGCAGTTTG GCTGCTCCTC
AGGCTCGTTG TCGGCATGGG CATGATGTGC CAATACATGG TGCTAGAAAG TTGGCTTAAC
GAACAAGCCG AAAGTAACCA AAGGGGCACA GTGTTCGCGA GTTATATGAT CGTATCTTAC
TTCGGCTTGA TCTTGGGCCA AGGCGCGATC AGTATCTTCC CCGAATTAGG CCTTGAGCCA
TTACTGCTGA TCGCGATTTG TTTCTCACTC TGTATAGTAC CGATTTCACT CACGCGTCGT
CTTCACCCTG CACCTTTGGT CCCAGCTCCA CTCAAAATTG CCCATTACTG GAAAAAAGCG
CCGCAGGCAC TCACAACCAT CGCGATTGGT AGCATGATAG TGGGTTCGTT TTATGGTCTC
GCGCCCGCCT ATGCTAGTAA CTTAGGTTTG CCGCCTGAAA AAGTCGCCAC TTATATGACT
GCAACGATTT TAGCAGGATT ACTGGCACAA TGGCCGATGG GGAAACTGTC CGACATTATG
TCCCGCAGTC GCCTTATTCG TATCAACTGC ATATTGCTCG GCATCTTAGC CTTAGCCATC
GCCTTAACGC CCTATCATCC AGTGATTTCG CTGGTGATGA CCTTTCTGTT TGGTATTTTA
GGTTTCACCT TCTATCCACT TGCTACGGCA CTGGCTAACT CACGAGTCGA ACAGAATGAG
CGGGTCGGTT TATCCGCCAC CATTTTATTA ACCTTCGGCT TAGGGGCCAG TATCGGCCCA
CTTATCGCCT CGACGTTGAT GCAATGGCTT GGCAACAGCA TGTTATATGG CTTTATGTCT
GCCTGTACCT TGATCCTATT CGTGCGGCTA CGTTACGTGC ATTCACAGCA GAAAGTCGAG
ACTAATGTCA CCCAAGATTA CATAATGGCG ACGGGCGATT TAGTCTCTTC ACCACTGGCG
GCAGCGCTGG ATCCAAGGGT TGATGTCGAA TCGATTCAAG AACATATGAC ACCCAGTGCT
AACCTAGATG AATCTGAGCA TGATTTAGGA GCTGATGGCG TCGATGACGA TATTATCGAC
GAAAATGACA GTGATGAGGA GCAACTCGCC TTCAGTTTCG ATATCGAGCA AGCAGAGCCT
GAAGCCGTTC AAACGGATGA AGCCGATAGC CATCAGGTTA ACCTAGACAA AGCGCAGACA
TAA
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| Protein sequence | MTNPLRTFAS LYSTTLLMVL AGGLLTTYLG LRLSVMNVPQ IWIGGMMSAY YVGLVAGSKI
GHRLIAQVGH IRAFVASAGI VAASALGHAL VDELAVWLLL RLVVGMGMMC QYMVLESWLN
EQAESNQRGT VFASYMIVSY FGLILGQGAI SIFPELGLEP LLLIAICFSL CIVPISLTRR
LHPAPLVPAP LKIAHYWKKA PQALTTIAIG SMIVGSFYGL APAYASNLGL PPEKVATYMT
ATILAGLLAQ WPMGKLSDIM SRSRLIRINC ILLGILALAI ALTPYHPVIS LVMTFLFGIL
GFTFYPLATA LANSRVEQNE RVGLSATILL TFGLGASIGP LIASTLMQWL GNSMLYGFMS
ACTLILFVRL RYVHSQQKVE TNVTQDYIMA TGDLVSSPLA AALDPRVDVE SIQEHMTPSA
NLDESEHDLG ADGVDDDIID ENDSDEEQLA FSFDIEQAEP EAVQTDEADS HQVNLDKAQT
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