Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0692 |
Symbol | |
ID | 5372270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 835290 |
End bp | 836123 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640828886 |
Product | ABC transporter related |
Protein accession | YP_001364912 |
Protein GI | 152999231 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGAAT CAAGCATGAC TCAAGAACAA ACGCCGTTGG TTGAGATCCG TAATTTGGGG TTTAGCCGCG GTCAGCGTGT GATATATGAA GATATTAGCC TGTCCATTCC AAGGGGCAAG GTGACGGCGA TCATGGGGCC GAGCGGCATA GGCAAAACGA CCCTGTTGAA GTTGATCGGC GGCCAATTAA CGCCTGACCA CGGACAAGTG TTATTTGATG GTCACGATAT CCATGGCGTG AGTCGCAATG AATTATTTAG TCTGCGTAAG CGGATGAGCA TGCTGTTTCA AAGCGGTGCG TTGTTTACCG ACATCAACGT GTTCGATAAC GTGGCCTTTG CGCTGCGCGA ACATTCAGGT CTGCCAGAAG ACATTATTCG CACTATCGTG CTGATGAAGC TCGAAGCCGT AGGTTTACGT GGTGCCGCCC AGATGATGCC AAGTGAATTA TCCGGTGGTA TGCAGCGCCG TGCGGCATTG GCCAGAGCCA TCGCACTTGA GCCTGAAATG GTGATGTACG ATGAACCTTT TGCCGGCCAA GATCCTATCT CTATGGGCGT GTTAGTGAAG CTGATCCGTG AGTTATCCGA TGCGCTGAAT CTGACCTCCA TTGTGGTCTC CCACGATGTG GATGAAGTCC TCGGTATTGC CGATTATGTG TATGTGGTGG CCGATAAAAA AGTCATCGCC CACGGCACGC CAGAAGAATT GAAGTACGCC GACAATCCGC AACTTAAACA GTTTATTCAA GGCGCGCCGG ATGGCCCTGT ACCGTTCCAT TATCCGGCGA ATGATTACCA ACAAGAATTA ATGACAAAAG GAGTTGGCAA GTGA
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Protein sequence | MSESSMTQEQ TPLVEIRNLG FSRGQRVIYE DISLSIPRGK VTAIMGPSGI GKTTLLKLIG GQLTPDHGQV LFDGHDIHGV SRNELFSLRK RMSMLFQSGA LFTDINVFDN VAFALREHSG LPEDIIRTIV LMKLEAVGLR GAAQMMPSEL SGGMQRRAAL ARAIALEPEM VMYDEPFAGQ DPISMGVLVK LIRELSDALN LTSIVVSHDV DEVLGIADYV YVVADKKVIA HGTPEELKYA DNPQLKQFIQ GAPDGPVPFH YPANDYQQEL MTKGVGK
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