Gene Shew185_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0688 
Symbol 
ID5371705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp832035 
End bp832589 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID640828882 
Productcell envelope biogenesis YhbN 
Protein accessionYP_001364908 
Protein GI152999227 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00274419 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAA ATAACGTATT ACTTGCCAGC CTAATGCTAA TAATGAGCAT GAGCGCCTTT 
GCTAAAGTCG ACGACCTGAA ACAGGAAGTC AAAATTAAGG CTGTGAGCCA AACGGCAGAT
ATCAAGAACA ACCAGATCAT CTTCTTTGGT CCGGTTGAAG TCACCCAAGG TTCGATTAAA
ATCCATGCAG ATCAACTGCG TGCATTTTCT GCCGAAGGTG AAAATAGCAA AATTTTAGTG
GCCACAGGTA ACCCTGCGAC GTACAGCCAA GTATTAGACG ATGGCCGTCC AGCCTCGGCG
AGCGCGAAAG AAATTCGTTA CGATATGGCG AGCCGCACCC TGACACTTAA AGGCAAAGCC
TCGTTAGATC AAGCGGGCAG CCAAGTGACG GGTAATTTGA TCCGCTACAA CATCATCCAG
CAAAAATTGA TTGCCGAGAG TACCGGCAGT GGCGACGATC GCGTGATCAC TATCATTCAG
CCAGAAAGCT ATCAAGATGA TGCCAAACCA GACGCGCCAG CAGATAAACC TGTGAAAAAG
CAGGACTCTA AATGA
 
Protein sequence
MKQNNVLLAS LMLIMSMSAF AKVDDLKQEV KIKAVSQTAD IKNNQIIFFG PVEVTQGSIK 
IHADQLRAFS AEGENSKILV ATGNPATYSQ VLDDGRPASA SAKEIRYDMA SRTLTLKGKA
SLDQAGSQVT GNLIRYNIIQ QKLIAESTGS GDDRVITIIQ PESYQDDAKP DAPADKPVKK
QDSK