Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0688 |
Symbol | |
ID | 5371705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 832035 |
End bp | 832589 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640828882 |
Product | cell envelope biogenesis YhbN |
Protein accession | YP_001364908 |
Protein GI | 152999227 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00274419 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAA ATAACGTATT ACTTGCCAGC CTAATGCTAA TAATGAGCAT GAGCGCCTTT GCTAAAGTCG ACGACCTGAA ACAGGAAGTC AAAATTAAGG CTGTGAGCCA AACGGCAGAT ATCAAGAACA ACCAGATCAT CTTCTTTGGT CCGGTTGAAG TCACCCAAGG TTCGATTAAA ATCCATGCAG ATCAACTGCG TGCATTTTCT GCCGAAGGTG AAAATAGCAA AATTTTAGTG GCCACAGGTA ACCCTGCGAC GTACAGCCAA GTATTAGACG ATGGCCGTCC AGCCTCGGCG AGCGCGAAAG AAATTCGTTA CGATATGGCG AGCCGCACCC TGACACTTAA AGGCAAAGCC TCGTTAGATC AAGCGGGCAG CCAAGTGACG GGTAATTTGA TCCGCTACAA CATCATCCAG CAAAAATTGA TTGCCGAGAG TACCGGCAGT GGCGACGATC GCGTGATCAC TATCATTCAG CCAGAAAGCT ATCAAGATGA TGCCAAACCA GACGCGCCAG CAGATAAACC TGTGAAAAAG CAGGACTCTA AATGA
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Protein sequence | MKQNNVLLAS LMLIMSMSAF AKVDDLKQEV KIKAVSQTAD IKNNQIIFFG PVEVTQGSIK IHADQLRAFS AEGENSKILV ATGNPATYSQ VLDDGRPASA SAKEIRYDMA SRTLTLKGKA SLDQAGSQVT GNLIRYNIIQ QKLIAESTGS GDDRVITIIQ PESYQDDAKP DAPADKPVKK QDSK
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