| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0676 |
|---|
| Symbol | |
|---|
| ID | 5373505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 821477 |
|---|
| End bp | 822337 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828871 |
|---|
| Product | protein of unknown function RIO1 |
|---|
| Protein accession | YP_001364897 |
|---|
| Protein GI | 152999216 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.295058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC CGAAACGAAT CCAACCCCTG GTTGATGAAG GACTGGTCGA TGAGGTCATT
AGCCAGTTAA TGAGCGGTAA AGAAGCGACT GTGTACGTTG TACGCAGTGG TGATGATATC
CGCTGTGCCA AAGTCTATAA AGAAGCGGAC AAGCGCAGTT TTAAGCAAGC TGTGTTGTAT
CAAGAAGGCC GAAAAGTCCG CAACAGCCGT CGTGCACGTG CGATGGAGAA AGGCTCTAAA
TTTGGTCGCG ATCAGCAGGA AGAAGCTTGG CAAAATGCCG AGGTTGAAGC GCTTTATCGT
TTAGCGAATG CGGGTGTGCG CGTGCCAACG CCCTATGGCT GTTTTGATGG CGTGTTGCTG
ATGGAGTTAG TGACGGATGC CGAGGGCAAT GTCGCTCCGA GATTGAACGA CGTCAGTATG
TCGGCAGAAA AAGCCCTGAA CGATCATGCG TTGGTGATGA CCTATGTCAA ACGTATGCTC
TGTGCGGGTT TAGTGCACGG TGACTTGTCT GAGTTTAACG TGTTAGTCGA TAGTGAAGGG
CCAGTGATTA TCGACTTGCC TCAGGCCGTC GATGCCGCGG CGAATAACCA TGCCAAATGG
ATGTTAGCGC GTGATGTGAA TAACATGACC CAATACTATG GCTTGTATGC TCCTGAGCTG
TTGAAAACAC AATACGCCAA AGAGATTTGG GCCCTGTTTG AAGCGGGTGA ATTGAAGCCT
GAAACGCCAT TAACCGGTGA GTTTACCGAA GTGTTGGTCG AAGCCGACGT CAGTGCCGTG
TTAGAGGAAA TTCAAGCGGC CTTTGAAGAG GCGCAAGAGC GTAAGCAAAG GATCCAAGAG
GCAAACGAAG AAGACTATTA A
|
|---|
| Protein sequence | MKTPKRIQPL VDEGLVDEVI SQLMSGKEAT VYVVRSGDDI RCAKVYKEAD KRSFKQAVLY
QEGRKVRNSR RARAMEKGSK FGRDQQEEAW QNAEVEALYR LANAGVRVPT PYGCFDGVLL
MELVTDAEGN VAPRLNDVSM SAEKALNDHA LVMTYVKRML CAGLVHGDLS EFNVLVDSEG
PVIIDLPQAV DAAANNHAKW MLARDVNNMT QYYGLYAPEL LKTQYAKEIW ALFEAGELKP
ETPLTGEFTE VLVEADVSAV LEEIQAAFEE AQERKQRIQE ANEEDY
|
|---|
| |