| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0668 |
|---|
| Symbol | |
|---|
| ID | 5373772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 811724 |
|---|
| End bp | 812431 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640828863 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001364889 |
|---|
| Protein GI | 152999208 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT CTTTATTACT CACCTTGGCC GTGATCCACT CGGTTGCCTT GATCAGCCCC
GGACCCGATT TCGCTATTAT GGTGAAGATT GCGACTCAGC AGTCGCGAAG CACGGCGATT
GCCGCAGCCG TGGGGATTTC AATCGCCATT TTAGCCCACA CGATTTTAAG TCTGACTGGC
GTGAGTCTGC TTATTAAGAG TTCACACACT CTGTATCTAT TAGTGCAAAT TGTGGGTGCG
TCTTACTTAG CTTGGATGGG GTTTGGTGCC CTGCGTGCAG GCCTTGCGAT ACTGGCTAAA
CGTAAAGCGA GTGCCAGTAC AAATGCTGGG ACAAATGTTG ATGCTCTTTC TGCTGACGTT
GAAGGCACTG CGTCTATTGC TGGTGGCTTA GGTGGCGCTA TGTCGCGCAG GCAAGGTTTT
TTGACTGGGC TTTATACCAA TCTATTGAAT CCCAAAGCAT TGGTGTTTTT CTTAACGCTG
TTTTCGGCCT TGATTACCCC AAGCGTCACC ACGAGCACTA AAATTGCCTC CGCTGTCTTG
TTGTTATCGC TGTCGCTGGC ATGGTTTGGC TTTTTGGCTG TGATGTTATC TAAGGCGCAG
GTGCAACTTA AATTGCAGCG ACTGACACCG ATTATCGATG CAATTATTGG TGTCATCTTT
ATGTCGGTCG CGCTGGCTAT TTACGCTAAC CTGTTGCTGA CGGCTTAG
|
|---|
| Protein sequence | MDLSLLLTLA VIHSVALISP GPDFAIMVKI ATQQSRSTAI AAAVGISIAI LAHTILSLTG
VSLLIKSSHT LYLLVQIVGA SYLAWMGFGA LRAGLAILAK RKASASTNAG TNVDALSADV
EGTASIAGGL GGAMSRRQGF LTGLYTNLLN PKALVFFLTL FSALITPSVT TSTKIASAVL
LLSLSLAWFG FLAVMLSKAQ VQLKLQRLTP IIDAIIGVIF MSVALAIYAN LLLTA
|
|---|
| |